******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 3.0 (Release date: 2004/07/26 08:17:15) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme.sdsc.edu. This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme.sdsc.edu. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= all_X_C.fa ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ CfChoxC4 1.0000 501 CfChoxC5 1.0000 501 CfChoxC6 1.0000 501 CfChoxC8 1.0000 501 CfChoxC10 1.0000 501 CfChoxC11 1.0000 501 CfChoxC12 1.0000 501 CfChoxC13 1.0000 501 HsChoxC4 1.0000 501 HsChoxC5 1.0000 501 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme all_X_C.fa -dna -mod zoops -minw 10 -maxw 10 -wg 11 -ws 1 -nmotifs 10 -evt 1e+07 -revcomp -maxiter 50 -distance 0.001 -prior dirichlet -b 0.01 -maxsize 1000000 model: mod= zoops nmotifs= 10 evt= 1e+07 object function= E-value of product of p-values width: minw= 10 maxw= 10 minic= 0.00 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 10 wnsites= 0.8 theta: prob= 1 spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 0.001 data: n= 5010 N= 10 strands: + - sample: seed= 0 seqfrac= 1 Letter frequencies in dataset: A 0.223 C 0.277 G 0.277 T 0.223 Background letter frequencies (from dataset with add-one prior applied): A 0.223 C 0.277 G 0.277 T 0.223 ******************************************************************************** ******************************************************************************** MOTIF 1 width = 10 sites = 8 llr = 99 E-value = 2.0e-002 ******************************************************************************** -------------------------------------------------------------------------------- Motif 1 Description -------------------------------------------------------------------------------- Simplified A 6::::::11: pos.-specific C ::::3::::: probability G ::::::::3: matrix T 4aaa8aa96a bits 2.2 *** ** * 1.9 *** ** * 1.7 *** ** * 1.5 *** *** * Information 1.3 ******** * content 1.1 ******** * (17.9 bits) 0.9 ********** 0.6 ********** 0.4 ********** 0.2 ********** 0.0 ---------- Multilevel ATTTTTTTTT consensus T C G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------- CfChoxC11 - 102 3.06e-07 GGGTAATTGT ATTTTTTTTT CCCCTAGCTG CfChoxC5 + 476 3.06e-07 GGTGCAGAAA ATTTTTTTTT TGGGCCCTCC HsChoxC5 + 174 6.12e-07 TCCAAGAACC TTTTTTTTTT TTNNNNNNNN CfChoxC10 - 438 6.12e-07 AGCTGACATC TTTTTTTTTT CCCCCATCCG HsChoxC4 - 314 9.91e-07 AATGTATCCA ATTTTTTTGT GTGTGTGGTG CfChoxC6 - 252 1.37e-06 TAAGACTTGG ATTTCTTTTT AAAAAACATA CfChoxC4 - 313 2.06e-06 ATGTATCCAA TTTTTTTTGT GTXXXXXXXX CfChoxC13 + 307 8.03e-06 GAGGCGGCGG ATTTCTTAAT GAGGAGTGTC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- CfChoxC11 3.1e-07 101_[-1]_390 CfChoxC5 3.1e-07 475_[+1]_16 HsChoxC5 6.1e-07 173_[+1]_318 CfChoxC10 6.1e-07 437_[-1]_54 HsChoxC4 9.9e-07 313_[-1]_178 CfChoxC6 1.4e-06 251_[-1]_240 CfChoxC4 2.1e-06 312_[-1]_179 CfChoxC13 8e-06 306_[+1]_185 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 1 width=10 seqs=8 CfChoxC11 ( 102) ATTTTTTTTT 1 CfChoxC5 ( 476) ATTTTTTTTT 1 HsChoxC5 ( 174) TTTTTTTTTT 1 CfChoxC10 ( 438) TTTTTTTTTT 1 HsChoxC4 ( 314) ATTTTTTTGT 1 CfChoxC6 ( 252) ATTTCTTTTT 1 CfChoxC4 ( 313) TTTTTTTTGT 1 CfChoxC13 ( 307) ATTTCTTAAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 10 n= 4920 bayes= 9.26209 E= 2.0e-002 148 -965 -965 75 -965 -965 -965 216 -965 -965 -965 216 -965 -965 -965 216 -965 -15 -965 175 -965 -965 -965 216 -965 -965 -965 216 -83 -965 -965 197 -83 -965 -15 148 -965 -965 -965 216 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 10 nsites= 8 E= 2.0e-002 0.625000 0.000000 0.000000 0.375000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.250000 0.000000 0.750000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.125000 0.000000 0.000000 0.875000 0.125000 0.000000 0.250000 0.625000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- Time 1.74 secs. ******************************************************************************** ******************************************************************************** MOTIF 2 width = 10 sites = 8 llr = 90 E-value = 5.0e+001 ******************************************************************************** -------------------------------------------------------------------------------- Motif 2 Description -------------------------------------------------------------------------------- Simplified A 1:::3954a8 pos.-specific C ::::1::::: probability G ::::61:::: matrix T 9aaa::56:3 bits 2.2 *** * 1.9 *** * 1.7 *** * 1.5 **** * * Information 1.3 **** * *** content 1.1 **** ***** (16.2 bits) 0.9 **** ***** 0.6 ********** 0.4 ********** 0.2 ********** 0.0 ---------- Multilevel TTTTGAATAA consensus A TA T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------- HsChoxC5 - 458 7.59e-07 TCTGCACCCT TTTTGATTAA GGGTGATTTG HsChoxC4 + 332 7.59e-07 ATTGGATACA TTTTGAATAA AGCGATTCGG CfChoxC5 - 454 7.59e-07 TCTGCACCCT TTTTGATTAA GGGTGATTTG CfChoxC4 + 332 7.59e-07 ATTGGATACA TTTTGAATAA AGCGATTCGG CfChoxC13 + 473 3.50e-06 GCAAGTGGAG TTTTAAAAAA GCTCGCGCAG CfChoxC12 + 44 1.25e-05 ATTCCAACGG TTTTAGTTAA TAAAGGAGCT CfChoxC11 + 258 1.56e-05 CTGCAATTGA TTTTCATAAT GTTTCTGCGG CfChoxC10 - 306 1.71e-05 GACCAATGGG ATTTGAAAAT GGCCTTGATG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- HsChoxC5 7.6e-07 457_[-2]_34 HsChoxC4 7.6e-07 331_[+2]_160 CfChoxC5 7.6e-07 453_[-2]_38 CfChoxC4 7.6e-07 331_[+2]_160 CfChoxC13 3.5e-06 472_[+2]_19 CfChoxC12 1.3e-05 43_[+2]_448 CfChoxC11 1.6e-05 257_[+2]_234 CfChoxC10 1.7e-05 305_[-2]_186 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 2 width=10 seqs=8 HsChoxC5 ( 458) TTTTGATTAA 1 HsChoxC4 ( 332) TTTTGAATAA 1 CfChoxC5 ( 454) TTTTGATTAA 1 CfChoxC4 ( 332) TTTTGAATAA 1 CfChoxC13 ( 473) TTTTAAAAAA 1 CfChoxC12 ( 44) TTTTAGTTAA 1 CfChoxC11 ( 258) TTTTCATAAT 1 CfChoxC10 ( 306) ATTTGAAAAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 10 n= 4920 bayes= 10 E= 5.0e+001 -83 -965 -965 197 -965 -965 -965 216 -965 -965 -965 216 -965 -965 -965 216 16 -115 117 -965 197 -965 -115 -965 116 -965 -965 116 75 -965 -965 148 216 -965 -965 -965 175 -965 -965 16 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 10 nsites= 8 E= 5.0e+001 0.125000 0.000000 0.000000 0.875000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.250000 0.125000 0.625000 0.000000 0.875000 0.000000 0.125000 0.000000 0.500000 0.000000 0.000000 0.500000 0.375000 0.000000 0.000000 0.625000 1.000000 0.000000 0.000000 0.000000 0.750000 0.000000 0.000000 0.250000 -------------------------------------------------------------------------------- Time 3.44 secs. ******************************************************************************** ******************************************************************************** MOTIF 3 width = 10 sites = 9 llr = 92 E-value = 2.9e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif 3 Description -------------------------------------------------------------------------------- Simplified A ::::::3::: pos.-specific C :3:2:::::: probability G a7a84a7a9a matrix T ::::6:::1: bits 2.2 1.9 * * * * * 1.7 * * * * * 1.5 * * * * * Information 1.3 * * * *** content 1.1 * ******** (14.7 bits) 0.9 ********** 0.6 ********** 0.4 ********** 0.2 ********** 0.0 ---------- Multilevel GGGGTGGGGG consensus C CG A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------- CfChoxC12 - 307 2.13e-06 CACTGGGGTG GGGGTGGGGG GACCAAACAC CfChoxC6 + 48 2.13e-06 AATTTTAGAA GGGGTGGGGG AGATAGAAAA CfChoxC10 - 419 4.78e-06 TCCCCCATCC GGGGGGGGGG CGGCTGGAGG CfChoxC11 + 59 6.50e-06 TCCTAATCCT GGGGTGAGGG TGGGGGGAGA HsChoxC5 - 490 1.94e-05 TG GCGGGGAGGG CCCAAAAAAA CfChoxC5 - 490 1.94e-05 TG GCGGGGAGGG CCCAAAAAAA CfChoxC13 + 278 2.20e-05 GGGAGGGGCG GGGCGGGGGG GCCGCGCGGG HsChoxC4 - 275 2.55e-05 CTGGGAGGCG GGGGTGGGTG GTGATGTGGG CfChoxC4 + 229 2.76e-05 GGTGGGGTGC GCGCTGGGGG NNNNNNNNNN -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- CfChoxC12 2.1e-06 306_[-3]_185 CfChoxC6 2.1e-06 47_[+3]_444 CfChoxC10 4.8e-06 418_[-3]_73 CfChoxC11 6.5e-06 58_[+3]_433 HsChoxC5 1.9e-05 489_[-3]_2 CfChoxC5 1.9e-05 489_[-3]_2 CfChoxC13 2.2e-05 277_[+3]_214 HsChoxC4 2.5e-05 274_[-3]_217 CfChoxC4 2.8e-05 228_[+3]_263 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 3 width=10 seqs=9 CfChoxC12 ( 307) GGGGTGGGGG 1 CfChoxC6 ( 48) GGGGTGGGGG 1 CfChoxC10 ( 419) GGGGGGGGGG 1 CfChoxC11 ( 59) GGGGTGAGGG 1 HsChoxC5 ( 490) GCGGGGAGGG 1 CfChoxC5 ( 490) GCGGGGAGGG 1 CfChoxC13 ( 278) GGGCGGGGGG 1 HsChoxC4 ( 275) GGGGTGGGTG 1 CfChoxC4 ( 229) GCGCTGGGGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 10 n= 4920 bayes= 8.96878 E= 2.9e+004 -982 -982 185 -982 -982 27 127 -982 -982 -982 185 -982 -982 -32 149 -982 -982 -982 68 132 -982 -982 185 -982 58 -982 127 -982 -982 -982 185 -982 -982 -982 168 -100 -982 -982 185 -982 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 10 nsites= 9 E= 2.9e+004 0.000000 0.000000 1.000000 0.000000 0.000000 0.333333 0.666667 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.222222 0.777778 0.000000 0.000000 0.000000 0.444444 0.555556 0.000000 0.000000 1.000000 0.000000 0.333333 0.000000 0.666667 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.888889 0.111111 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- Time 5.49 secs. ******************************************************************************** ******************************************************************************** MOTIF 4 width = 10 sites = 2 llr = 25 E-value = 8.4e+006 ******************************************************************************** -------------------------------------------------------------------------------- Motif 4 Description -------------------------------------------------------------------------------- Simplified A :::::::::: pos.-specific C :::aaaa:5: probability G aaa::::a:a matrix T ::::::::5: bits 2.2 1.9 ******** * 1.7 ******** * 1.5 ******** * Information 1.3 ******** * content 1.1 ********** (17.7 bits) 0.9 ********** 0.6 ********** 0.4 ********** 0.2 ********** 0.0 ---------- Multilevel GGGCCCCGCG consensus T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------- HsChoxC4 - 84 2.13e-06 GGCCTCTGCT GGGCCCCGTG GGCCTCGGCT CfChoxC12 + 488 4.78e-06 GCTGCCGGTC GGGCCCCGCG GAAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- HsChoxC4 2.1e-06 83_[-4]_408 CfChoxC12 4.8e-06 487_[+4]_4 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 4 width=10 seqs=2 HsChoxC4 ( 84) GGGCCCCGTG 1 CfChoxC12 ( 488) GGGCCCCGCG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 10 n= 4920 bayes= 9.19159 E= 8.4e+006 -765 -765 185 -765 -765 -765 185 -765 -765 -765 185 -765 -765 185 -765 -765 -765 185 -765 -765 -765 185 -765 -765 -765 185 -765 -765 -765 -765 185 -765 -765 85 -765 116 -765 -765 185 -765 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 10 nsites= 2 E= 8.4e+006 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.500000 0.000000 0.500000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- Time 7.36 secs. ******************************************************************************** ******************************************************************************** MOTIF 5 width = 10 sites = 8 llr = 81 E-value = 1.4e+006 ******************************************************************************** -------------------------------------------------------------------------------- Motif 5 Description -------------------------------------------------------------------------------- Simplified A :::96:4::: pos.-specific C :::1::::91 probability G aaa:1a6a16 matrix T ::::3::::3 bits 2.2 1.9 *** * * 1.7 *** * * 1.5 **** * * Information 1.3 **** * ** content 1.1 **** **** (14.6 bits) 0.9 ********* 0.6 ********** 0.4 ********** 0.2 ********** 0.0 ---------- Multilevel GGGAAGGGCG consensus T A T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------- HsChoxC5 + 358 3.10e-06 TCCCTTATTT GGGAAGAGCG CATAGGATAA CfChoxC5 + 354 3.10e-06 TCCCTTATTT GGGAAGAGCG CATAGGATAA CfChoxC10 + 182 4.49e-06 CTTTGTTCGC GGGAAGGGCT CGGGCGCCCC CfChoxC11 - 140 6.21e-06 GGTGGGCGGT GGGATGGGCG GGGGCGGTGG CfChoxC13 + 268 1.40e-05 ACGTGGGCGC GGGAGGGGCG GGGCGGGGGG CfChoxC12 + 327 1.71e-05 CACCCCAGTG GGGAAGGGGG GAGCTGGAGC CfChoxC6 - 10 1.71e-05 ATTTCTCCAT GGGAAGAGCC CCTTCCCAG CfChoxC8 - 385 5.82e-05 XXXXXXXACC GGGCTGGGCT CCGCGGGCCG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- HsChoxC5 3.1e-06 357_[+5]_134 CfChoxC5 3.1e-06 353_[+5]_138 CfChoxC10 4.5e-06 181_[+5]_310 CfChoxC11 6.2e-06 139_[-5]_352 CfChoxC13 1.4e-05 267_[+5]_224 CfChoxC12 1.7e-05 326_[+5]_165 CfChoxC6 1.7e-05 9_[-5]_482 CfChoxC8 5.8e-05 384_[-5]_107 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF 5 width=10 seqs=8 HsChoxC5 ( 358) GGGAAGAGCG 1 CfChoxC5 ( 354) GGGAAGAGCG 1 CfChoxC10 ( 182) GGGAAGGGCT 1 CfChoxC11 ( 140) GGGATGGGCG 1 CfChoxC13 ( 268) GGGAGGGGCG 1 CfChoxC12 ( 327) GGGAAGGGGG 1 CfChoxC6 ( 10) GGGAAGAGCC 1 CfChoxC8 ( 385) GGGCTGGGCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 10 n= 4920 bayes= 8.99859 E= 1.4e+006 -965 -965 185 -965 -965 -965 185 -965 -965 -965 185 -965 197 -115 -965 -965 148 -965 -115 16 -965 -965 185 -965 75 -965 117 -965 -965 -965 185 -965 -965 166 -115 -965 -965 -115 117 16 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif 5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 10 nsites= 8 E= 1.4e+006 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.875000 0.125000 0.000000 0.000000 0.625000 0.000000 0.125000 0.250000 0.000000 0.000000 1.000000 0.000000 0.375000 0.000000 0.625000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.875000 0.125000 0.000000 0.000000 0.125000 0.625000 0.250000 -------------------------------------------------------------------------------- Time 9.18 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- CfChoxC4 5.76e-06 81_[-4(5.97e-05)]_137_[+3(2.76e-05)]_74_[-1(2.06e-06)]_9_[+2(7.59e-07)]_160 CfChoxC5 2.35e-07 353_[+5(3.10e-06)]_90_[-2(7.59e-07)]_12_[+1(3.06e-07)]_4_[-3(1.94e-05)]_2 CfChoxC6 5.59e-07 9_[-5(1.71e-05)]_28_[+3(2.13e-06)]_194_[-1(1.37e-06)]_240 CfChoxC8 4.26e-01 384_[-5(5.82e-05)]_107 CfChoxC10 2.03e-06 181_[+5(4.49e-06)]_54_[-5(7.11e-05)]_50_[-2(1.71e-05)]_103_[-3(4.78e-06)]_9_[-1(6.12e-07)]_54 CfChoxC11 2.26e-06 58_[+3(6.50e-06)]_33_[-1(3.06e-07)]_6_[-5(7.62e-05)]_12_[-5(6.21e-06)]_2_[-3(8.17e-05)]_96_[+2(1.56e-05)]_234 CfChoxC12 1.03e-05 43_[+2(1.25e-05)]_67_[+5(5.51e-05)]_176_[-3(2.13e-06)]_10_[+5(1.71e-05)]_16_[+3(2.13e-06)]_125_[+4(4.78e-06)]_4 CfChoxC13 8.60e-06 186_[-5(9.85e-05)]_71_[+5(1.40e-05)]_[+3(2.20e-05)]_19_[+1(8.03e-06)]_156_[+2(3.50e-06)]_19 HsChoxC4 1.03e-07 83_[-4(2.13e-06)]_181_[-3(2.55e-05)]_29_[-1(9.91e-07)]_8_[+2(7.59e-07)]_160 HsChoxC5 4.51e-07 173_[+1(6.12e-07)]_174_[+5(3.10e-06)]_90_[-2(7.59e-07)]_11_[+1(3.98e-05)]_1_[-3(1.94e-05)]_2 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because motif E-value > 1.00e+07. ******************************************************************************** CPU: hotchocolate.bioinf.uni-leipzig.de ********************************************************************************