RID=1097159675-29882-187324589203.BLASTQ1,

BLASTP 2.2.9 [May-01-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
RID: 1097159675-29882-187324589203.BLASTQ1
Query= (330 letters)
Database: PDB protein database 18,695 sequences; 4,163,319 total letters
If you have any problems or questions with the results of this search
please refer to the BLAST FAQs
Taxonomy reports
Distribution of 21 Blast Hits on the Query Sequence

Related Structures

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|27065049|pdb|1H2N|A  Chain A, Factor Inhibiting Hif-1 Alp...    33   0.084 
gi|33357073|pdb|1IZ3|A  Chain A, Dimeric Structure Of Fih (F...    33   0.084 
gi|27065812|pdb|1MZF|A  Chain A, Human Factor Inhibiting Hif...    33   0.084 
gi|42543131|pdb|1NRF|A  Chain A, C-Terminal Domain Of The Ba...    31   0.32  
gi|27574087|pdb|1N63|E  Chain E, Crystal Structure Of The Cu...    29   0.93  
gi|51247136|pdb|1OKZ|A  Chain A, Structure Of Human Pdk1 Kin...    27   3.5   
gi|47169307|pdb|1UVR|A  Chain A, Structure Of Human Pdk1 Kin...    27   3.5   
gi|47169288|pdb|1UU9|A  Chain A, Structure Of Human Pdk1 Kin...    27   3.5   
gi|50513707|pdb|1T5L|B  Chain B, Crystal Structure Of The Dn...    27   4.6   
gi|13096236|pdb|1EE0|B  Chain B, 2-Pyrone Synthase Complexed...    27   4.6   
gi|6730157|pdb|1C5G|A  Chain A, Plasminogen Activator Inhibi...    27   6.0   
gi|49259007|pdb|1SIW|B  Chain B, Crystal Structure Of The Ap...    27   6.0   
gi|21466093|pdb|1LJ5|A  Chain A, 1.8a Resolution Structure O...    27   6.0   
gi|33357654|pdb|1OC0|A  Chain A, Plasminogen Activator Inhib...    27   6.0   
gi|4699815|pdb|9PAI|A  Chain A, Cleaved Substrate Variant Of...    27   6.0   
gi|6573637|pdb|1DB2|B  Chain B, Crystal Structure Of Native ...    27   6.0   
gi|10120510|pdb|1DVM|D  Chain D, Active Form Of Human Pai-1 ...    27   6.0   
gi|7766820|pdb|1D9Z|A  Chain A, Crystal Structure Of The Dna...    27   6.0   
gi|7766819|pdb|1D9X|A  Chain A, Crystal Structure Of The Dna...    27   6.0   
gi|4699714|pdb|1A7C|A  Chain A, Human Plasminogen Activator ...    27   6.0   
gi|48425360|pdb|1RKT|B  Chain B, Crystal Structure Of Yfir, ...    26   7.8   

Alignments


>gi|27065049|pdb|1H2N|A   Chain A, Factor Inhibiting Hif-1 Alpha
 gi|27065046|pdb|1H2M|A   Chain A, Factor Inhibiting Hif-1 Alpha In Complex With Hif-1 Alpha
           Fragment Peptide
 gi|27065042|pdb|1H2L|A   Chain A, Factor Inhibiting Hif-1 Alpha In Complex With Hif-1 Alpha
           Fragment Peptide
 gi|27065036|pdb|1H2K|A   Chain A, Factor Inhibiting Hif-1 Alpha In Complex With Hif-1 Alpha
           Fragment Peptide
          Length = 349

 Score = 32.7 bits (73), Expect = 0.084
 Identities = 36/123 (29%), Positives = 51/123 (41%), Gaps = 15/123 (12%)

Query: 113 WIEKLKAELRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSN 172
           WI K + +      TS+  ++     G    AH+D   N   QI+G K   L        
Sbjct: 169 WINKQQGKRGWGQLTSNLLLI--GMEGNVTPAHYDEQQNFFAQIKGYKRCILFP------ 220

Query: 173 PMQHYDLSEAP-YYPDDLQSYWKGDPPK-EDLPDAEIVN-----LTPGTMLYLPRGLWHS 225
           P Q   L   P ++P D QS    D P  E  P+ + V      + PG +LY+P   WH 
Sbjct: 221 PDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVVGPGDVLYIPMYWWHH 280

Query: 226 TKS 228
            +S
Sbjct: 281 IES 283



>gi|33357073|pdb|1IZ3|A   Chain A, Dimeric Structure Of Fih (Factor Inhibiting Hif)
          Length = 349

 Score = 32.7 bits (73), Expect = 0.084
 Identities = 36/123 (29%), Positives = 51/123 (41%), Gaps = 15/123 (12%)

Query: 113 WIEKLKAELRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSN 172
           WI K + +      TS+  ++     G    AH+D   N   QI+G K   L        
Sbjct: 169 WINKQQGKRGWGQLTSNLLLI--GXEGNVTPAHYDEQQNFFAQIKGYKRCILFP------ 220

Query: 173 PMQHYDLSEAP-YYPDDLQSYWKGDPPK-EDLPDAEIVN-----LTPGTMLYLPRGLWHS 225
           P Q   L   P ++P D QS    D P  E  P+ + V      + PG +LY+P   WH 
Sbjct: 221 PDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVVGPGDVLYIPXYWWHH 280

Query: 226 TKS 228
            +S
Sbjct: 281 IES 283



>gi|27065812|pdb|1MZF|A   Chain A, Human Factor Inhibiting Hif (Fih1) In Complex With 2-
           Oxoglutarate
 gi|27065810|pdb|1MZE|A   Chain A, Human Factor Inhibiting Hif (Fih1)
          Length = 351

 Score = 32.7 bits (73), Expect = 0.084
 Identities = 36/123 (29%), Positives = 51/123 (41%), Gaps = 15/123 (12%)

Query: 113 WIEKLKAELRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSN 172
           WI K + +      TS+  ++     G    AH+D   N   QI+G K   L        
Sbjct: 171 WINKQQGKRGWGQLTSNLLLI--GMEGNVTPAHYDEQQNFFAQIKGYKRCILFP------ 222

Query: 173 PMQHYDLSEAP-YYPDDLQSYWKGDPPK-EDLPDAEIVN-----LTPGTMLYLPRGLWHS 225
           P Q   L   P ++P D QS    D P  E  P+ + V      + PG +LY+P   WH 
Sbjct: 223 PDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVVGPGDVLYIPMYWWHH 282

Query: 226 TKS 228
            +S
Sbjct: 283 IES 285



>gi|42543131|pdb|1NRF|A   Chain A, C-Terminal Domain Of The Bacillus Licheniformis Blar
           Penicillin-Receptor
          Length = 262

 Score = 30.8 bits (68), Expect = 0.32
 Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 3/81 (3%)

Query: 83  VSPAEALEWYEKGAALEFDFTDLFIPQVRRWIEKLKAELRLPAGTSSKAIVYAAKNGGGF 142
           +SP E +   +K    EFDF    I  V+  I   ++  R+ +G +  +++    + G F
Sbjct: 156 ISPLEQVNILKKFYDNEFDFKQSNIETVKDSIRLEESNGRVLSGKTGTSVINGELHAGWF 215

Query: 143 KAHFDAYTNLIF---QIQGEK 160
             + +   N  F    IQGEK
Sbjct: 216 IGYVETADNTFFFAVHIQGEK 236



>gi|27574087|pdb|1N63|E   Chain E, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
           Carbon Monoxide Reduced State
 gi|27574084|pdb|1N63|B   Chain B, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
           Carbon Monoxide Reduced State
 gi|27574081|pdb|1N62|E   Chain E, Crystal Structure Of The Mo,Cu-Co Dehydrogenase (Codh), N-
           Butylisocyanide-Bound State
 gi|27574078|pdb|1N62|B   Chain B, Crystal Structure Of The Mo,Cu-Co Dehydrogenase (Codh), N-
           Butylisocyanide-Bound State
 gi|27574075|pdb|1N61|E   Chain E, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
           Dithionite Reduced State
 gi|27574072|pdb|1N61|B   Chain B, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
           Dithionite Reduced State
 gi|27574069|pdb|1N60|E   Chain E, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
           Cyanide-Inactivated Form
 gi|27574066|pdb|1N60|B   Chain B, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
           Cyanide-Inactivated Form
 gi|27574059|pdb|1N5W|E   Chain E, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
           Oxidized Form
 gi|27574056|pdb|1N5W|B   Chain B, Crystal Structure Of The Cu,Mo-Co Dehydrogenase (Codh);
           Oxidized Form
          Length = 809

 Score = 29.3 bits (64), Expect = 0.93
 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 4/48 (8%)

Query: 61  NPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLFIP 108
           NP+++ G        G+T+ F V+  + + + E+G  L   F D F+P
Sbjct: 691 NPMIIEGQV----HGGLTEAFAVAMGQEIRYDEQGNVLGASFMDFFLP 734



>gi|51247136|pdb|1OKZ|A   Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
           Ucn-01
 gi|51247135|pdb|1OKY|A   Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
           Staurosporine
 gi|47169287|pdb|1UU8|A   Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
           Bim-1
 gi|47169286|pdb|1UU7|A   Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
           Bim-2
 gi|47169285|pdb|1UU3|A   Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
           Ly333531
          Length = 310

 Score = 27.3 bits (59), Expect = 3.5
 Identities = 11/26 (42%), Positives = 17/26 (65%)

Query: 92  YEKGAALEFDFTDLFIPQVRRWIEKL 117
           ++K   LE+DF + F P+ R  +EKL
Sbjct: 241 FQKIIKLEYDFPEKFFPKARDLVEKL 266



>gi|47169307|pdb|1UVR|A   Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
           Bim-8
 gi|34811348|pdb|1H1W|A   Chain A, High Resolution Crystal Structure Of The Human Pdk1
           Catalytic Domain
          Length = 289

 Score = 27.3 bits (59), Expect = 3.5
 Identities = 11/26 (42%), Positives = 17/26 (65%)

Query: 92  YEKGAALEFDFTDLFIPQVRRWIEKL 117
           ++K   LE+DF + F P+ R  +EKL
Sbjct: 221 FQKIIKLEYDFPEKFFPKARDLVEKL 246



>gi|47169288|pdb|1UU9|A   Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
           Bim-3
          Length = 286

 Score = 27.3 bits (59), Expect = 3.5
 Identities = 11/26 (42%), Positives = 17/26 (65%)

Query: 92  YEKGAALEFDFTDLFIPQVRRWIEKL 117
           ++K   LE+DF + F P+ R  +EKL
Sbjct: 220 FQKIIKLEYDFPEKFFPKARDLVEKL 245



>gi|50513707|pdb|1T5L|B   Chain B, Crystal Structure Of The Dna Repair Protein Uvrb Point
           Mutant Y96a Revealing A Novel Fold For Domain 2
 gi|50513706|pdb|1T5L|A   Chain A, Crystal Structure Of The Dna Repair Protein Uvrb Point
           Mutant Y96a Revealing A Novel Fold For Domain 2
          Length = 658

 Score = 26.9 bits (58), Expect = 4.6
 Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 2/72 (2%)

Query: 45  GFEKVRTLENVLAIYNNPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTD 104
           G  K  T+ NV+A  N P +V+        +  ++     P  A+E++   +  ++   +
Sbjct: 42  GTGKTFTISNVIAQVNKPTLVIAHNKTLAGQLYSELKEFFPHNAVEYFV--SYYDYAQPE 99

Query: 105 LFIPQVRRWIEK 116
            ++PQ   +IEK
Sbjct: 100 AYVPQTDTYIEK 111



>gi|13096236|pdb|1EE0|B   Chain B, 2-Pyrone Synthase Complexed With Acetoacetyl-Coa
 gi|13096235|pdb|1EE0|A   Chain A, 2-Pyrone Synthase Complexed With Acetoacetyl-Coa
 gi|10835613|pdb|1QLV|B   Chain B, Pyrone Synthase (Pys) From Gerbera Hybrida
 gi|10835612|pdb|1QLV|A   Chain A, Pyrone Synthase (Pys) From Gerbera Hybrida
          Length = 402

 Score = 26.9 bits (58), Expect = 4.6
 Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 3/70 (4%)

Query: 6   ESVLESIISPVTMSEFLEEYWPVKP--LVARGEVERFTSIPGFEKVRTLENVLAIYNNPV 63
           E+  E  +SP+ ++++   +W V P       +VER  ++   +K+R   +VL+ Y N +
Sbjct: 285 ENAAEKALSPLGITDWNSVFWMVHPGGRAILDQVERKLNLKE-DKLRASRHVLSEYGNLI 343

Query: 64  MVVGDAVIEE 73
                 +I+E
Sbjct: 344 SACVLFIIDE 353



>gi|6730157|pdb|1C5G|A   Chain A, Plasminogen Activator Inhibitor-1
          Length = 402

 Score = 26.6 bits (57), Expect = 6.0
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 7/52 (13%)

Query: 176 HYDLSEAPYYPDDLQSYWKGDPPKE-------DLPDAEIVNLTPGTMLYLPR 220
           +YD+ E PY+ D L  +      KE       ++  A++++   G M  LPR
Sbjct: 243 YYDILELPYHGDTLSMFIAAPYEKEVPLSALTNILSAQLISHWKGNMTRLPR 294



>gi|49259007|pdb|1SIW|B   Chain B, Crystal Structure Of The Apomolybdo-Narghi
 gi|46015401|pdb|1R27|D   Chain D, Crystal Structure Of Nargh Complex
 gi|46015399|pdb|1R27|B   Chain B, Crystal Structure Of Nargh Complex
 gi|37927741|pdb|1Q16|B   Chain B, Crystal Structure Of Nitrate Reductase A, Narghi, From
           Escherichia Coli
          Length = 512

 Score = 26.6 bits (57), Expect = 6.0
 Identities = 24/117 (20%), Positives = 50/117 (42%), Gaps = 9/117 (7%)

Query: 113 WIEKLKAELRLPAGTSSKAI--VYAAKNGGGFKAHFDA----YTNLIFQIQGEKTWKLAK 166
           WI K+  +L+   G  +  +  ++A  +  G   +++     Y NL    +G K+  +A+
Sbjct: 66  WIRKINGKLQPRMGNRAMLLGKIFANPHLPGIDDYYEPFDFDYQNLHTAPEGSKSQPIAR 125

Query: 167 NENVSNPMQHYDLSEAPYYPDDLQSYW---KGDPPKEDLPDAEIVNLTPGTMLYLPR 220
             ++    +   + + P + DDL   +     D   +++  A         M+YLPR
Sbjct: 126 PRSLITGERMAKIEKGPNWEDDLGGEFDKLAKDKNFDNIQKAMYSQFENTFMMYLPR 182



>gi|21466093|pdb|1LJ5|A   Chain A, 1.8a Resolution Structure Of Latent Plasminogen Activator
           Inhibitor-1(Pai-1)
 gi|10835819|pdb|1DVN|A   Chain A, Latent Form Of Plasminogen Activator Inhibitor-1 (Pai-1)
          Length = 379

 Score = 26.6 bits (57), Expect = 6.0
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 7/52 (13%)

Query: 176 HYDLSEAPYYPDDLQSYWKGDPPKE-------DLPDAEIVNLTPGTMLYLPR 220
           +YD+ E PY+ D L  +      KE       ++  A++++   G M  LPR
Sbjct: 220 YYDILELPYHGDTLSMFIAAPYEKEVPLSALTNILSAQLISHWKGNMTRLPR 271



>gi|33357654|pdb|1OC0|A   Chain A, Plasminogen Activator Inhibitor-1 Complex With Somatomedin
           B Domain Of Vitronectin
 gi|6730096|pdb|1B3K|D   Chain D, Plasminogen Activator Inhibitor-1
 gi|6730095|pdb|1B3K|C   Chain C, Plasminogen Activator Inhibitor-1
 gi|6730094|pdb|1B3K|B   Chain B, Plasminogen Activator Inhibitor-1
 gi|6730093|pdb|1B3K|A   Chain A, Plasminogen Activator Inhibitor-1
          Length = 379

 Score = 26.6 bits (57), Expect = 6.0
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 7/52 (13%)

Query: 176 HYDLSEAPYYPDDLQSYWKGDPPKE-------DLPDAEIVNLTPGTMLYLPR 220
           +YD+ E PY+ D L  +      KE       ++  A++++   G M  LPR
Sbjct: 220 YYDILELPYHGDTLSMFIAAPYEKEVPLSALTNILSAQLISHWKGNMTRLPR 271



>gi|4699815|pdb|9PAI|A   Chain A, Cleaved Substrate Variant Of Plasminogen Activator
           Inhibitor-1
          Length = 379

 Score = 26.6 bits (57), Expect = 6.0
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 7/52 (13%)

Query: 176 HYDLSEAPYYPDDLQSYWKGDPPKE-------DLPDAEIVNLTPGTMLYLPR 220
           +YD+ E PY+ D L  +      KE       ++  A++++   G M  LPR
Sbjct: 220 YYDILELPYHGDTLSMFIAAPYEKEVPLSALTNILSAQLISHWKGNMTRLPR 271



>gi|6573637|pdb|1DB2|B   Chain B, Crystal Structure Of Native Plasminogen Activator
           Inhibitor- 1
 gi|6573636|pdb|1DB2|A   Chain A, Crystal Structure Of Native Plasminogen Activator
           Inhibitor- 1
          Length = 377

 Score = 26.6 bits (57), Expect = 6.0
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 7/52 (13%)

Query: 176 HYDLSEAPYYPDDLQSYWKGDPPKE-------DLPDAEIVNLTPGTMLYLPR 220
           +YD+ E PY+ D L  +      KE       ++  A++++   G M  LPR
Sbjct: 218 YYDILELPYHGDTLSMFIAAPYEKEVPLSALTNILSAQLISHWKGNMTRLPR 269



>gi|10120510|pdb|1DVM|D   Chain D, Active Form Of Human Pai-1
 gi|10120509|pdb|1DVM|C   Chain C, Active Form Of Human Pai-1
 gi|10120508|pdb|1DVM|B   Chain B, Active Form Of Human Pai-1
 gi|10120507|pdb|1DVM|A   Chain A, Active Form Of Human Pai-1
          Length = 379

 Score = 26.6 bits (57), Expect = 6.0
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 7/52 (13%)

Query: 176 HYDLSEAPYYPDDLQSYWKGDPPKE-------DLPDAEIVNLTPGTMLYLPR 220
           +YD+ E PY+ D L  +      KE       ++  A++++   G M  LPR
Sbjct: 220 YYDILELPYHGDTLSMFIAAPYEKEVPLSALTNILSAQLISHWKGNMTRLPR 271



>gi|7766820|pdb|1D9Z|A   Chain A, Crystal Structure Of The Dna Repair Protein Uvrb In
           Complex With Atp
          Length = 657

 Score = 26.6 bits (57), Expect = 6.0
 Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 2/72 (2%)

Query: 45  GFEKVRTLENVLAIYNNPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTD 104
           G  K  T+ NV+A  N P +V+        +  ++     P  A+E++   +  ++   +
Sbjct: 42  GTGKTFTISNVIAQVNKPTLVIAHNKTLAGQLYSELKEFFPHNAVEYFV--SYYDYYQPE 99

Query: 105 LFIPQVRRWIEK 116
            ++PQ   +IEK
Sbjct: 100 AYVPQTDTYIEK 111



>gi|7766819|pdb|1D9X|A   Chain A, Crystal Structure Of The Dna Repair Protein Uvrb
          Length = 658

 Score = 26.6 bits (57), Expect = 6.0
 Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 2/72 (2%)

Query: 45  GFEKVRTLENVLAIYNNPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTD 104
           G  K  T+ NV+A  N P +V+        +  ++     P  A+E++   +  ++   +
Sbjct: 42  GTGKTFTISNVIAQVNKPTLVIAHNKTLAGQLYSELKEFFPHNAVEYFV--SYYDYYQPE 99

Query: 105 LFIPQVRRWIEK 116
            ++PQ   +IEK
Sbjct: 100 AYVPQTDTYIEK 111



>gi|4699714|pdb|1A7C|A   Chain A, Human Plasminogen Activator Inhibitor Type-1 In Complex
           With A Pentapeptide
          Length = 379

 Score = 26.6 bits (57), Expect = 6.0
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 7/52 (13%)

Query: 176 HYDLSEAPYYPDDLQSYWKGDPPKE-------DLPDAEIVNLTPGTMLYLPR 220
           +YD+ E PY+ D L  +      KE       ++  A++++   G M  LPR
Sbjct: 220 YYDILELPYHGDTLSMFIAAPYEKEVPLSALTNILSAQLISHWKGNMTRLPR 271



>gi|48425360|pdb|1RKT|B   Chain B, Crystal Structure Of Yfir, A Putative Transcriptional
           Regulator From Bacillus Subtilis
 gi|48425359|pdb|1RKT|A   Chain A, Crystal Structure Of Yfir, A Putative Transcriptional
           Regulator From Bacillus Subtilis
          Length = 205

 Score = 26.2 bits (56), Expect = 7.8
 Identities = 11/30 (36%), Positives = 19/30 (63%)

Query: 273 HESSKSELNGYLESLIQTLSENAETLTPEQ 302
           H+S  + ++ YL+ L + L + A+TL P Q
Sbjct: 81  HQSVWASISSYLDELTEGLRDVADTLAPVQ 110






  Database: PDB protein database
    Posted date:  Oct 7, 2004 12:08 AM
  Number of letters in database: 4,163,319
  Number of sequences in database:  18,695
  
Lambda     K      H
   0.316    0.133    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,372,139
Number of Sequences: 18695
Number of extensions: 58667
Number of successful extensions: 144
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 144
Number of HSP's gapped (non-prelim): 7
length of query: 330
length of database: 4,163,319
effective HSP length: 90
effective length of query: 240
effective length of database: 2,480,769
effective search space: 595384560
effective search space used: 595384560
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)