Results of 123D+ run
Database of 4381 domains
Matrix: gonnet
Secondary structure prediction
Contact Capacity Potentials
Contact Capacity Potentials
Penalty for Gap opening: -10.000000
Penalty for Gap extension: -1.000000
Q_Seq: T0219 length: 330a.a.
20 best hits:
Alignments:
seq 1efdN 667 354 0.00 -100000.00 265 26
s_m = 1469 s_ss = 1 s_cc = 300 go = -800 ge = -380
H HHHHHHHH H H HHHH H H HHEH
-------MSAVTESVLESI----ISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKV
| *|| |: *.| * *| :.:: : :*:: : :|*||..|. :||
AGIDPNRIVALEWLPVELLLALGIVPYGVADTINYRLWVSEPPLPDSVIDVGLRTEPNLE
UTTTTTTEEE HHHHHHHHHH TTEETTHHHHHHHHTTTT TTTTEE TTTTT HH
HHHHHHEH EH EEEEE HEEE HHHHHHHHHH HH E HHH
RTLENVLA-IYNNPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLFIP
| |*. | | . .. . . .| . |:*|..:*.:. : * .|* .|
LLTEMKPSFMVWSAGYGPSPEMLARIAPGRGFNFSDGKQPLAMARKSLTEMADLLNL-QS
HHHHH TTEEEEETTT HHHHHHH EEEE TTTTTHHHHHHHHHHHHHHHH HH
HHHHHHHHHHHHH H HEEEEEHH EE EH HHHEHHHEH HHHH
QVRRWIEKLKAELRLPAGTSSK------AIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTW
| ||:|||| .|* :|.* |:|::...|. . |. *|| * |
AAETHLAQYEDFIRSMKPRFVKRGARPLLLTTLIDPRHMLVFGPNSLFQEILDEYGIPN-
HHHHHHHHHHHHHHHHGGGTTTT EEEEEEEETTEEEEETTTTHHHHHHHHH T
HH EE EEE EE
KLAKNENVSNPMQHYDLSEAPYYPDD--LQSYWKGDPPKEDLPDAEIVNLTP----GTML
|:|.*..... . |:.: : *|*: * .|. .: | * | || * *.|
-AWQGETNFWGSTAVSIDRLAAYKDVDVLCFDHDNSKDMDALMATPLWQAMPFVRAGRFQ
TTTTEEEEEGGGGTTTTTTEEEEETTTTHHHHHHHHH HHHHH HHHHH EE
HE HH HHEHHE HHHHHHHHHHHHHHHHHH HHHHHH H HHH
YLPRGLWHSTKSDQATLALNITFGQPAWLDLMLAALRKKLISDNRFRELAVNHQSLHESS
|*. ||. | *::: ||.|.|*|
RVPAVWFYGA-----------TLSAMHFVRVLDNAIG.......................
EE TTTT HHHHHHHHHHHHHHH
H HH HHHHHHHHH H HH EHH HHHHHHHHHHH
KSELNGYLESLIQTLSENAETLTPEQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
......................................................
seq 1ek8A 655 346 0.00 -100000.00 190 15
s_m = 889 s_ss = -16 s_cc = 280 go = -300 ge = -250
H HHHHHHHH H H HHHH H H HHEHHHHHHHEHEH
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYN
............................................................
EEEEE HEEE HHHHHHHHHH HH E HHHHHHHHHHHHHHH
NPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLFIPQVRRWIEKLKAE
*||| |
....................................................MISDIRKD
HHHHHHH
H HHEEEEEHH EE EH HHHEHHHEH HHHH HH
LRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTW------KLAKNENVSNPM
. |*| :|| . .*| | :| | || *.:* || |..: . .
AEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEYYGTPT-PLRQLASVTVEDSRTLKI
HHHHHHHHHHHHHHHHHH TTTTTTTTEEEETTEEE EGGG EEEEEEETTEEEE
EE EEE EE HE
QHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLY-LPRG--------LWHS
: * *. *:| : |:.. .* *. | .*| | **| *: .
NVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRV----------PLPP-LTEERRKDLTKI
EETTGGGHHHHHHHHHHH EEETTEEEE E HHHHHHHHHH
HH HHEHHE HHHHHHHHHHHHHHHHHH HHHHHH H HHH H HH HHH
TKSDQATLALNITFGQPAWLDLMLAALRKKLISDNRFRELAVNHQSLHESSKSELNGYLE
| : . || .. * | * * |* **|. .*:: * *..| ::|: |*:
VRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEAALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHTTT HHHHHHHHHHHHHHHHHHHHHHHHHHH
HHHHHH H HH EHH HHHHHHHHHHH
SLIQTLSE-NAETLTPEQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
: |:*||
DKEAELMQF.....................................
HHHHHHH
seq 1dd5A 644 344 0.00 -100000.00 186 7
s_m = 919 s_ss = 30 s_cc = 318 go = -400 ge = -310
H HHHHHHHH H H HHHH H H HHEHHHHHHHEHEH
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYN
............................................................
EEEEE HEEE HHHHHHHHHH HH E HHHHHHHHHHHHHHH
NPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLFIPQVRRWIEKLKAE
|| ** || : ||| :
.........................................MVNPFIKEAKEKMKRTLEK
U HHHHHHHHHHHHHHHH
H HHEEEE EHH EE EH HHHEHHHEH HHHH HH
LRLPAGTSSKAIVYA--AKNGGGFKAHFDAYTNLIFQIQGEKTW---KLAKNENVSNPMQ
|. :| *|| | :| | || *::* |**| | | :
IE-------------DELRKMRTGKPSPAILEEIKVDYYGVPT-PVNQLATISISEERTL
HH HHHHH GGGGTTTEEEETTEEE EGGG EEEEETTTTEE
EE EEE EE HE H
HYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLPRG--------LWHSTK
. . |.:.:|. | | : * .:: *. |. :* |*| |: .|*
VIKPWDKSVLSLIEKAINASDLGLNPINDGNVI------RLVFPS-PTTEQREKWVKKAK
EEEETTTHHHHHHHHHHHH EEETTTTE EEE HHHHHHHHHHHH
H HHEHHE HHHHHHHHHHHHHHHHHH HHHHHH H HHH H HH HHHHH
SDQATLALNITFGQPAWLDLMLAALRKKLISDNRFRELAVNHQSLHESSKSELNGYLESL
: . |* ..*| | : .| **||. ..:* * *..| :.*: ||*:
EIVEEGKIAIRNIRREILKKIKEDQKEGLIPEDDAKRLENEIQKLTDEFIEKLDEVFEIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HHHH H HH EHH HHHHHHHHHHH
IQTLSE-NAETLTPEQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
|:||*
KEEIMEF.....................................
HHHHHH
seq 1dgw. 581 336 0.00 -100000.00 167 0
s_m = 867 s_ss = 21 s_cc = -42 go = -200 ge = -100
H HHHHHHHH H H HHHH H H HHEHHHHHHHEHEH
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYN
............................................................
EEEEE HEEE HHHHHHHHHH HH E HHHHHHHHHHHHHHH
NPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLFIPQVRRWIEKLKAE
|
...........................................................D
H HHEEEEEHH EE EH HHHEHHHEH HHHH HH
LRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTW------KLAKNENVSNPM
| . | |||. .*::* ||| |* ||| | | : .. .
KPFNLRSRDPIY----SNNYGKLYEITPEKNSQLRDLD----ILLNCLQMNEGALFVPHY
TTTT TTE ETTTEEEEEE GGG HHHHH EEEEEETTTT
EE EEE EE HE HH HHEHH
QHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLPRGLWHSTKSDQATLA
: :: :: :.. *. : .. . *:|*||| |*.|||| *| .:
NSRATVILVANEGRAEVELVGLEQQQMQLRRYAATLSEGDIIVIPSSFPVALKAASDLNM
TTTT UUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUU
E HHHHHHHHHHHHHHHHHH HHHHHH H HHH H HH HHHHHHHHH H
LNITFGQPAWLDLMLAALRKKLISDNRFRELAVNHQSLHESSKSELNGYLESLIQTLSEN
*||.:.: ** . :*.|:| : . : .. *| : *:. **.| . .
VGIGVNAENNERNFLAGHKENVIRQIPRQVSDLTFPGSGEEVEELLENQKESYFVDGQP.
UUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUU
HH EHH HHHHHHHHHHH
AETLTPEQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
....................................
seq 1qc7A 575 332 0.00 -100000.00 101 4
s_m = 548 s_ss = 38 s_cc = 166 go = -200 ge = -40
H HHHHHHHH H H HHHH H H HHEHHHHHHHEHEH
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYN
............................................................
EEEEE HEEE HHHHHHHHHH HH E HHHHHHHHHHHHHHH
NPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLFIPQVRRWIEKLKAE
............................................................
H HHEEEEEHH EE EH HHHEHHHEH HHHHHH
LRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLS
............................................................
EE EEE EE HE HH HHEHHE
EAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLPRGLWHST--KSDQATLALNIT
|. ||* *.. || ..* . ***.|
............................MFVFEDILKLDDRSIQLVLREVDTRDLALALK
GGGGGGT HHHHHHHHH HHHHHHHHH
HHHHHHHHHHHHHHHHHH HHHHHH H HHH H HH HHHHHHHHH H
FGQPAWLDLMLAALRKKLISDNRFRELAVNHQSLHESSKSELNGYLESLIQTLSENAETL
:|. :| | | ::*. | :..:|: || |:| .*|. | ||*||*.*:.*.
GASDELKEKIFKNMSKR--AAALLKDELEYMGPVRLKDVEEAQQKIINIIRRLEEAGEIV
HHHHHHHHH HH HHHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHH
HH EHH HHHHHHHHHHH
TPEQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
: :||
IARGGGEELIM.....................
TTTTT
seq 1u9aA 559 346 0.00 -100000.00 161 13
s_m = 834 s_ss = 0 s_cc = 196 go = -400 ge = -170
H HHHHHHHH H H HHHH H H HHEHHHHHHHEHEH
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYN
............................................................
EEEEE HEEE HHHHHHHHHH HH E HHHHHHHHHHHHHHH
NPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLFIPQVRRWIEKLKAE
............................................................
H HHEEEEEHH EE EH HHHEHHHEH HHHHHH
LRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLS
* |:: . : .. ::: | | .
.............................LNMSGIALSRLAQERKAWRKDHPFGFVAVPT
HHHHHHHHHHHHHHHHHH TTTTEEEEE
EE EE E EE HE HH
EAPYYPDDLQ------SYWKGDPPKEDLPDAEI-----VNLTPGTMLYLPRGLWHSTKSD
:.* ..|*: .:.**|* *. :.| | :|* .| :|*| *|* .
KNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPP-LFHPNVYP
ETTTT EEEEEEEEEEEETTTTTTTTEEEEEEEE TTTTTTTT EEEETTT TTTTTT
HHEHHE HH HHHHHHHHHHHHHHHH HHHHHH H HHH H HH HH
QATLALNITFGQPAW-----LDLMLAALRKKLISDNRFRELAVNHQSLHESSKSELNGYL
:|*| *|* .. :* |. |* |:.|*|: *. : . : :|::||:*|...:
SGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRV
TTTT GGGTTTTT TTTT HHHHHHHHHHHHH TTTTTTTHHHHHHHHH HHHHHHHH
HHHHHHH H HH EHH HHHHHHHHHHH
ESLIQTLSENAETLTPEQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
: .|| : |
RAQAKKFAPS....................................
HHHHHHH
seq 1cfzA 556 340 0.00 -100000.00 169 16
s_m = 1156 s_ss = -49 s_cc = -30 go = -400 ge = -170
H HHHHHHHH H H HHHH H H HHEHHHHHHHEHEH
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYN
............................................................
EEEEE HEEE HHHHHHHHHH HH E HHHHHHHHHHHHHHH
NPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLFIPQVRRWIEKLKAE
............................................................
H HHEEEEEHH EE EH HHHEHHHEH HHHHH H
LRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWK---------LAKNENVS
||| | *. | | *:
.............................MRILVLGVGNILL-TDEAIGVRIVEALEQRY
EEEEEE TTTT GGGGHHHHHHHHHHHHE
EE EEE EE HE HH HH
NPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLPRGLWHSTKSDQA
..: :. : . |.:* . . . . :. | |: .:**** *|| | *
ILPDYVEILDGGTAGMELLGDMANRDHLIIADAIVSKKNAPGTMMILRD------EEVPA
E TTTEEEEEEETT GGGHHHHTTTTEEEEEEETTTTTTTTTEEEEEE HHHHH
EHHE HHHHHHHHH HHHHHHHHH HHHHHH H HHH H HH HHHHHHHH
TLALNITFGQPAWLDLMLAA-LRKKLISDNRFRELAVNHQSLHESSKSELNGYLESLIQT
:: :*| :*: ||*.| *: :| .:. .. . ::. *:: . | .|* :||
LFTNKISPHQLGLADVLSALRFTGEFPKKLTLVGVIPESLEPHIGLTPTVEAMIEPALEQ
HHTTTTTHHHHHHHHHHHHHHHH TTEEEEEEEE T HHHHHHHHHHHHH
H H HH EHH HHHHHHHHHHH
LSENAETLTPEQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
| | ..:| * | : .**
VLAALRESGVE-AIPRSDS.....................
HHHHHHH EETTT
seq 1f75A 545 361 0.00 -100000.00 236 30
s_m = 1390 s_ss = 36 s_cc = 64 go = -700 ge = -420
H HHHHHHHH H H HHHH H H HH
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFT-------------SIPGFE
.|. | .. .: *|: || .:| *|| | :
......MFPIKKRKAIKNNNINAAQIPKHIAIIMDGNGRWAKQKKMPRIKGHYEGMQTVR
UUUUUUUUUUUUU TTTTTTTEEEEEE HHHHHHHH HHHHHHHHHHHHH
EHHHHHHHEHEH EEEEE HEEE HHHHH HHHHH HH E
KVRTLENVLAIYNNPVMVVGDAVIEESEGITDRFLVSPAEAL-----EWYEKGAALE-FD
*|| | *.| | || |: . . | *.| * * .**|| |* |
KITRYASDLGVKYLTLYAFSTENWSRPKDEVNYLMKLPGDFLNTFLPELIEKNVKVETIG
HHHHHHHHH EEEEEE UUUUUUUUUUUU GGGHHHHHHHHHHHHHHHHH EEEEE
HHHHHHHHHHHHHHHH HHEEEEEHH EE E H HHHEHHHEH HH
FTDLFIPQVRRWIEKLKAELRLPAGTSSKAIVYAAKNGGGFKAHF-DAYTNLIFQIQGEK
*:* . |.| :.||:.* . | |.| |. * * ** ||| | :*. .
FIDDLPDHTKKAVLEAKEK----TKHNTGLTLVFALNYGG-----RKEIISAVQLIAERY
GGG HHHHHHHHHHHHH TTTT EEEEETTT H HHHHHHHHHHHHHHH
HHHH EE E EE EE
TWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAE-IVNLTPGTMLYLP
. . :|:|.* : * .*. | |* | :.*|. |: | *| |: .||.|||
KSGEISLDEISETHFNEYLFTANMPDPELLIRTSGEERLSNF----LIWQCSYSEFVFID
HH GGG HHHHGGGTTTTTT TTEEEETTTTTTTTTT TTTTTTTTEEEE
HE HH H HEHHE HHHHHHHHHHHHHHHHHH HHHHHH H
RGL-----WHSTKSDQ-----ATLALNITFGQPAWLDLMLAALRKKLISDNRFRELAVNH
.| || ||.
EFWPDFNEESLAQCISIYQNR.......................................
GGG HHHHHHHHHHHH
HHH H HH HHHHHHHHH H HH EHH HHHHHHHHHHH
QSLHESSKSELNGYLESLIQTLSENAETLTPEQIFQSQDSDFDPYQSTQLVFRQLLTSYK
............................................................
F
.
seq 1ko9A 545 338 0.00 -100000.00 122 6
s_m = 853 s_ss = -3 s_cc = 130 go = -400 ge = -90
H HHHHHHHH H H HHHH H H HHEHHHHHHHEHEH
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYN
............................................................
EEEEE HEEE HHHHHHHHHH HH E HHHHHHHHHHHHHHH
NPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLFIPQVRRWIEKLKAE
............................................................
H HHEEEEEHH EE EH HHHEHHHEH HHHHHH
LRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLS
*| *: | .* *::|..*|
.....................................GHRTLASTPALWASIPCPRSELR
TTTTTGGG EEEE TTTTT
EE EEE EE H E HH HHEH
EAPYYPDDLQSYWKGDPPKEDL----PDAEIVNL--TPGTMLYLPRGLW-HSTKSDQATL
| :*| . * . *:. |:|:* *|||| . .| : |*
LDLVLPSGQSFRWREQSPAH--WSGVLADQVWTLTQTEEQLHCTVYR--GDKSQASRPTP
GGGTTTTTTTT EEEEETTE EEEEETTEEEEEEEETTEEEEEE TTTT H
HE HHHHH HHHHHHHHHHHHH HHHHHH H HHH H HH HHHHHHHHH
ALNITFGQPAWLDL-MLAALRKKLISDNRFRELAVNHQSLHESSKSELNGYLESLIQTLS
|: . ** | ..|:||| :* .*:* * | *.: | .
DELEAVRKYFQLDVTLAQLYHHWGSVDSHFQEVAQKFQGVRLLRQ...............
HHHHHHHHHHTTTT HHHHHHHHHHH HHHHHHHHHTTTT
H HH EHH HHHHHHHHHHH
ENAETLTPEQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
......................................
seq 1tyfA 542 351 0.00 -100000.00 193 14
s_m = 1430 s_ss = -96 s_cc = 228 go = -700 ge = -300
H HHHHHHHH H H HHHH H H HHEHHHHHHHEHEH
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYN
............................................................
EEEEE HEEE HHHHHHHHHH HH E HHHHHHHHHHHHHHH
NPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLFIPQVRRWIEKLKAE
............................................................
H HHEEEEEHH EE EH HHHEHHHEH HHHHHH
LRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLS
| |* * : . | . . ..
..........................ALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQ
UUUUUUUUUU TTTTHHHHHHHH EEEEE
EE EEE EE HE HH HHEH
EAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLPRGLWHSTKSDQATL-------
.: .:|| .. .: *|:|.| :** *:: ||*. |*|
VEDHMANLIVAQMLFLEAENPEKDIYLYINSPG-------GVITAGMSIYDTMQFIKPDV
T HHHHHHHHHHHHHHHHHTTTT EEEEEEE T HHHHHHHHHHHHH E
HE HHHHHHHHHHHH HHHHHH HHHHHH H HHH H HH HH
-ALNITFGQPAWLDLMLAALRK--------KLISDNRFRELAVNHQSLHESSKSELNGYL
|. || | : | *:.* . || .| .. |. |||:.. *|:...
STICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAR-EILKVK
EEEEEEEEE HHHHHHHH TTTTEEETTTTEEEE HHHHHHHHH HHHHHH
HHHHHHH H HH EHH HHHH HHHHHHH
ESLIQTLSENAETLTPEQIFQSQDSD--FDPYQSTQL-VFRQLLTS--YKF
|.||| |||.| | |:*** ||:|.* :|| || | |: :|**|
GRMNELMALHTGQ-SLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN...
HHHHHHHHHHH HHHHHHHHH EEEEHHHHHHHTTTTEE
seq 1a6cA 520 332 0.00 -100000.00 124 3
s_m = 982 s_ss = -15 s_cc = -60 go = -300 ge = -70
H HHHHHHHH H H HHHH H H HHEHHHHHHHEHEH
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYN
............................................................
EEEEE HEEE HHHHHHHHHH HH E HHHHHHHHHHHHHHH
NPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLFIPQVRRWIEKLKAE
*
..........................................................AV
H HHEEEEEHH EE EH HHHE HHHEH HHHHHH
LRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNL-IFQIQGEKTWKLAKNENVSNPMQHYDL
.*| *. |:: | . . | *. |||| ||| *.::|: |. . ** . .
TVVPDPTCCGTLSFKVPKDAKKGKHLGTFDIRQAIMDYGGLHSQEWCAKGIVNPTFTVRM
TTTEEEEEEEE TTTTTTTTEEEEEEHHHHHHH HHHHHHHHHHTEE EEEE
EE EEE EE HE HH HHEHHE
SEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLPRGLWHSTKSDQATLALNITF
.::: * . *. *:| .:* |. * *. **:. ||| |* :.|:::|.|
HAPRNAFAGLSIACTFDDYKRIDLPALGNECPPSEMFELPTKVFML--KDADVHEWQFNY
E TTTTTTTTEEEEEEETTT TTTTTTTTTTTTGGG EEETTT TTTTTEEE TT
HHHHHHHHHHHHHHHHHH HHHHHH H HHH H HH HHHHHHHHH H
GQPAWLDLMLAALRKKLISDNRFRELAVNHQSLHESSKSELNGYLESLIQTLSENAET-L
*| . * : . .| : :| . |: |: . | | | |: *
GELTGHGL---CNWANVATQPTLYFFVASTNQVTMAADWQCIVTMHVDMGPVIDRFELN.
TTTTT E E TTTT EEEEEE TTTT EEEEEEE T TTTT
HH EHH HHHHHHHHHHH
TPEQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
................................
seq 1vin_ 516 351 0.00 -100000.00 124 16
s_m = 674 s_ss = 37 s_cc = 152 go = -200 ge = -210
H HHHHHHHH H H HHHH H H HHEHHHHHHHEHEH
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYN
............................................................
EEEEE HEEE HHHHHHHHHH HH E HHHHHHHHHHHHHHH
NPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLFIPQVRRWIEKLKAE
............................................................
H HHEEEEEHH EE EH HHHEHHHEH HHHHHH
LRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLS
............................................................
EE EEE EE HE HH HHEHHE
EAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLPRGLWHSTKSDQATLALNITFG
* : |* . . *. .||.. ||*.
...............................PTINQFLTQYFLHQQPANCKVESLA----
HHHHHHHHGGGTTTT HHHHHHH
HHHHHHHHHHHHHHHHHH HHHHHH H HHH H HH H
-----------------QPAWLDLMLAALRKKLISDNRFRELAVNHQSLHESSKSELNGY
.*||| : : * ||||. *. *|| . .|| : |
MFLGELSLIDADPYLKYLPSVIAAAAFHLALYTVTGQSWPESLVQKTGYTLETLKPCLLD
HHHHHHHHH HHHHH HHHHHHHHHHHHHHHHH HHHHHHH TTTTHHHHHHH
HHHHHHHH H HH EHH HHHHHHHHHHH
LESLIQTLSENAETLTPEQIFQSQD----SDFDPYQSTQLVFRQLLTSYKF
*|::.:. |:*.| .*.:||*: * :|* .|..*
LHQTYLRAPQHAQQSIREKYKNSK-YHGVSLLNPPETLNL...........
HHHHHHHGGGTTTHHHHHHH GG GTTGGG TTTT
seq 1awj_ 514 337 0.00 -100000.00 57 5
s_m = 644 s_ss = 52 s_cc = 86 go = -200 ge = -100
H HHHHHHHH H H HHHH H H HHEHHHHHHHEHEH
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYN
............................................................
EEEEE HEEE HHHHHHHHHH HH E HHHHHHHHHHHHHHH
NPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLFIPQVRRWIEKLKAE
............................................................
H HHEEEEEHH EE EH HHHEHHHEH HHHHHH
LRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLS
|.* :. * .
................................................KKPLPPTPEDNR
EE EEE EE HE HH HHEHH
EAPYYPDDLQSYWKGDPPKE-DLPDAEIVNLTPGTMLYLP-----RGLWHSTKSDQATLA
.:: *.: : | * ...* :| *.|||||** |||* ::| .
RSFQEPEETLVIALYD----YQTNDPQELALRCDEEYYL-LDSSEIHWWRVQDKNGHEGY
TTTT T TTTTT T TTT TTTTTTTT T TTTTTTT
E H HHHHHHHHHHHHHHHHH HHHHHH H HHH H HH HHHHHHHHH H
LNITFGQPA-WLDLMLAALRKKLISDNRFRELAVNHQSLHESSKSELNGYLESLIQTLSE
| .| :|
APSSYLVEKS..................................................
TTTTT
HH EHH HHHHHHHHHHH
NAETLTPEQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
.....................................
seq 1jk3A 514 336 0.00 -100000.00 89 10
s_m = 1011 s_ss = -13 s_cc = 126 go = -400 ge = -250
H HHHHHHHH H H HHHH H H HHEHHHHHHHEHEH
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYN
............................................................
EEEEE HEEE HHHHHHHHHH HH E HHHHHHHHHHHHHHH
NPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLFIPQVRRWIEKLKAE
| *|: .| . . :* .* .|| . *| |*.|.
.......GPVWRKHYITYRINNYTPDMNREDVDYAIRKAFQ----------VWSNVTPLK
EEEEEE TTTT HHHHHHHHHHHHH HHHH E
H HHEEEEEHH EE EH HHHEHHHEH HHHHHH
LRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLS
|. .|.::|||*.|* .|* : ** | .|. |.| |.: :. * *
FSKINTGMADILVVFARGAHGDFHAFDGKGGILA--------HAFGPGSGIGGDAHFDED
EEE TTEEEEEETTTT TTTT TTTTE EEE TTTTTEEEEETT
EE EEE EE HE HH HHEHH
EAPYYPDDLQSYWKGDPPKED------LPDAEIVNLTPGTMLYLPRGLWHSTKSDQATLA
*. ::| .. :. |: . .*|.||| * .| :: . . .
EFWTTHSGGTNLFLT------AVHAIGHSLGLGHSSDPKAVMF-PTYKYVDINTFRLSAD
T EE EEHHHH HHHHHHHHH TTTTTTT TTTTT HH
E HHHHHHHHHHHHHHHHHH HHHHHH H HHH H HH HHHHHHHHH H
LNITFGQPAWLDLMLAALRKKLISDNRFRELAVNHQSLHESSKSELNGYLESLIQTLSEN
|||: .
DIRGIQSLYG..................................................
HHHHHHHH
HH EHH HHHHHHHHHHH
AETLTPEQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
....................................
seq 1kjwA 514 338 0.00 -100000.00 62 5
s_m = 892 s_ss = -42 s_cc = 96 go = -300 ge = -150
H HHHHHHHH H H HHHH H H HHEHHHHHHHEHEH
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYN
............................................................
EEEEE HEEE HHHHHHHHHH HH E HHHHHHHHHHHHHHH
NPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLFIPQVRRWIEKLKAE
............................................................
H HHEEEEEHH EE EH HHHEHHHEH HHHHHH
LRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLS
............................................................
EE EEE EE HE HH HHEHHE
EAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLP-----RGLWHSTKSDQATLAL
. .. .: *| *.: : | |..*||*.| :.|* ::. |
.....GFYIRALFDYDKTKDCGFLSQALSFRFGDVLHV-IDAGDEEWWQARRVHSDSETD
EEEEE T HHHHH T TTTTEEEEE EET TTTEEEEEE TTTTTTT
HHHHHHHHHHHHHHHHHH HHHHHH H HHH H HH HHHHHHHHH
NITFGQPAWLDLMLAALRKKLISDNRFRELAVNHQSLHESSKSELN---GYLESLIQTLS
*|* |*| ..|:| .| | ... ||.* *:
DIGF-IPS------KRRVERREWSRLKAKDWGSSSGSQGREDSVLSYET...........
EE EE HHHHHHHHHH UUUTTTT EEE
H HH EHH HHHHHHHHHHH
ENAETLTPEQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
......................................
seq 1lbu_ 513 330 0.00 -100000.00 90 7
s_m = 706 s_ss = 5 s_cc = 132 go = -300 ge = -70
H HHHHHHHH H H HHHH H H HHEHHHHHHHEHEH
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYN
.|. .| |:|| | : * * .||
..................................DGCYTWSGTLSEGS--SGEAVRQLQI
TTTTE E HHHHHHHH
EEEEE HEEE HHHHHHHHHH HH E HHHHHHHHHHHHHHH
NPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLFIPQVRRWIEKLKAE
| .*. | * || | . ||| :. * .*:| *::|| *:|*: :
RVAGYPGTGAQLAIDGQFGPATKAAVQRFQSAYG---LAADGI--AGPATFNKIYQLQDD
HHTTTTTTTT EE HHHHHHHHHHHHHH T HHHHHHHHHHTTT
H HHEEEEEHH EE EH HHHEHHHEH HHHHHH
LRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLS
..*
DCTP........................................................
TT T
EE EEE EE HE HH HHEHHE
EAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLPRGLWHSTKSDQATLALNITFG
............................................................
HHHHHHHHHHHHHHHHHH HHHHHH H HHH H HH HHHHHHHHH H H
QPAWLDLMLAALRKKLISDNRFRELAVNHQSLHESSKSELNGYLESLIQTLSENAETLTP
............................................................
H EHH HHHHHHHHHHH
EQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
..............................
seq 1jp3A 511 347 0.00 -100000.00 230 16
s_m = 1645 s_ss = 7 s_cc = -118 go = -800 ge = -400
H HHHHHHHH H H HHHH H H HHEHH
-MSAVTESVLESIISPVT--MSEFLEEY-----WPVKPLV--ARGEVERFTSIPGFEKVR
* . *. : *|.::||| | : | * .* | :. | .| : .|||
MMLSATQPLSEKLPAHGCRHVAIIM---DGNGRWAKK---QGKIRAFGHKAGAKSVRRAV
UUUUUUUUUUUU TTTT EEEEEU HHHHHHH H HHHHHHHHHHHHHHHH
HHHHHEHEH EEEEE HEEE HHHHHHHHH H HH E
TLENVLAIYNNPVMVVGDAVIEESEGITDRFLVSPAEALEWYE------KGAALEFDFTD
| .*. : || |: . . | | |**| : | | |. |
SFAANNGIEALTLYAFSSENWNRPAQEVSALMELFVWALD---SEVKSLHRHNVRLRIIG
HHHHHH EEEE UUUUUUUUUUUUUUUHHHHHHHH HHHHHHHHH EEEEE
HHHHHHHHHHHHHHHH HHEEEEEHH EE EH HHHEHHHEH HHHHHH
LFIPQVRRWIEKLKAELRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKL
. . *.:*.|. . *.**. : |.:** |||: |* :|| | |. |*
DTSRFNSRLQERIRKSEALTAGNTGLTLNIAA----NYGGRWDIVQGVRQLAEKVQQGNL
TTTT HHHHHHHHHHHHHHTTT EEEEET TT HHHHHHHHHHHHHHHHHH
EE EEE EE HE
AKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLPRGLWH
.|.|.| * | .:. * ** | . *:. |: | . | |: .||.|:| ||
-QPDQIDEEMLNQHVCMHELAPVDLVIRTGGEHRISNFLL---WQIAYAELYFTDVLWP-
GGG GUGGGGTTUT EEEE TTTTTT TTTTTTEEEE GG
HH HHEHHE HHHHHHHHHHHH HHHHHH HHHHHH H HHH H HH H
STKSDQATLALNITFGQPAWLDLMLAALRK-KLISDNRFRELAVNHQSLHESSKSELNGY
.* : :|| *| ..
-------------DFDEQDFEGALNAFANRE.............................
G HHHHHHHHHHHHHH
HHHHHHHH H HH EHH HHHHHHHHHHH
LESLIQTLSENAETLTPEQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
...............................................
seq 1jgtA 507 344 0.00 -100000.00 309 33
s_m = 1582 s_ss = -39 s_cc = 48 go = -800 ge = -390
H HHHHHHHH H H HHHH H H HHEHHHHHHHEHEH
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVER-FTSIPGFEKVRTLENVLAIY
| :|| |* .: |*. |*| .. . || |:. ..:*|
........PGLSRRILPEGEAVA--------AVRAALEKAVAQRVTPGDTPLVVLSGGID
T HHHHHH HHHHHHHHHHHHH TTTT EEE HH
EEEEE HEEE HHHHH HHHHH HH E HHHHHHHHHHHHH
NNPVMVVGDAVIEESEGITDRFLVSPAEAL-EWYEKGAALEFDFTDLFIPQVRRWIEKLK
| * .:| . |:* |: |. *: | |: | |: | |: :||| ||| .
SSGVAACAHRAAGELDTVSMGTDTSNEFREARAVVDHLRTRHREITIPTTELLAQLPYAV
HHHHHHHHHHHHTTTEEEEEETTTTT HHHHHHHHHHH EEEEEE HHHHHHHHHHHH
HHH HHEEEEEHH EE EH HHHEHHHEH HHHHHH
AELRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYD
: :||: .||| |: : . | . *| ||* || *
WASESVDPDIIEYLLPLTALYRALDGPER----RILTGYG-----------ADIPLGGMH
HHH HHHHHHHHHHHHHHHH EEE TTT TTTTTTTTT
EE EEE EE HE H H HHEHH
LSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLPRGLWHSTK----SDQATLA
. : *: . ... .| . .*|| ||.: | | | : *::* *:
REDRLPALDTVLAHDMATFDGLNEMSPVLSTLAGHWTTH--PYWDREVLDLLVSLEAGLK
HHHHHHHHHHHHH TTTTTTTTHHHHHH EEE GGG HHHHHHHHHT GGGT
E HHHHHHHHHHHHHHH HHH HHHHHH H HHH H HH HHHH
LNITFGQPAWLDLMLAALRKKLI--------SDNRFRELAVNHQSLHESSKSELNGYLES
.. |.. .::* :**||||| : ...| . * ... || .|
RRHGRDKWVLRAAMADALPAETVNRPKLGVHEGSGTTSSFSRLLLDHGVAEDRVHEAKRQ
TTTTTTTHHHHHHHTTTT HHHHH UUUUUUUUU HHHHHHHHH TTTHHHHHHHH
HHHHH H HH EHH HHHHHHHHHHH
LIQTLSENAETLTPEQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
.|::* | . . | . | *. . .
VVRELFDLTVGGGRHPSEVDTDDVVRSVADRT............
HHHHHHHHHHTTT GGG HHHHHHHHGGG
seq 1jpmA 505 337 0.00 -100000.00 133 14
s_m = 819 s_ss = -20 s_cc = 214 go = -400 ge = -160
H HHHHHHHH H H HHHH H H HHEHHHHHHHEHE
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGE--VERFTSIPGFEKVRTLENVLAI
: |. . | .: ||| *:| : :*
..............................MKIIRIETSRIAVPLTKPFKTALRTVYTAE
EEEEEEEEEEEEEEEEEEEETTEEEEEEE
H EEEEE HE EE HHHHHHHHHH HH E H HHHHHHHH
YNNPVMVVGDAV--IEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLF--IPQVRRWI
| |: || |.* . . :*. .||| .|| | : |* :|:||| *
SVIVRITYDSGAVGWGEAPPTLVITGDSMDSIESAIHHVLKPALLGKSL-AGYEAILHDI
EEEEEEEETTT EEEEEE TTTTTTT HHHHHHHHHHHHHHHHTTEET TTHHHHHHHH
HHHHHHH HHEEEEEHH EE EH HHHEHHHEH HHHHHH
EKLKAELRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQG-EKTWKLAKNENVSNP
.|*. ||| *|| |.: *.: | *: *
QHLLTGNMSAKAAVEMALYDGWAQMCGLP---------LYQMLGG...............
HHH HHHHHHHHHHHHHHHHHHH T HHHHH
EE EEE EE HE HH HHEH
MQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLPRGLWHSTKSDQATL
............................................................
HE HHHHHHHHHHHHHHHHHH HHHHHH H HHH H HH HHHHHHHHH H
ALNITFGQPAWLDLMLAALRKKLISDNRFRELAVNHQSLHESSKSELNGYLESLIQTLSE
............................................................
HH EHH HHHHHHHHHHH
NAETLTPEQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
.....................................
seq 1bo9A 504 332 0.00 -100000.00 73 2
s_m = 510 s_ss = 31 s_cc = 36 go = -100 ge = -20
H HHHHHHHH H H HHHH H H HHEHHHHHHHEHEH
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYN
............................................................
EEEEE HEEE HHHHHHHHHH HH E HHHHHHHHHHHHHHH
NPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLFIPQVRRWIEKLKAE
............................................................
H HHEEEEEHH EE EH HHHEHHHEH HHHHHH
LRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLS
............................................................
EE EEE EE HE HH HHEHHE
EAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLPRGLWHSTKSDQATLALNITFG
**
.........................................................TFN
T
HHHHHHHHHHHHHHHHHH HHHHHH H HHH H HH HHHHHHHHH H
QPAWLDLMLAALRKKLISDNRFRELAVNHQSLHESSKSEL--NGYLESLIQTLSENAETL
| . ||.| .*|. * || .||| |. . : |. :: | | :*||**:| .:||
PSSDVAALHKAIMVKGVDEATIIDILTKRNNAQRQQIKAAYLQETGKPLDETLKKALTGH
TTHHHHHHHHHHHTTTTTTTTHHHHHHH HHHHHHHHHHHHHHH HHHHHHH TTT
HH EHH HHHHHHHHHHH
TPEQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
* | : |:
LEEVVLALLK......................
THHHHHH
seq 1gph1 499 343 0.00 -100000.00 224 10
s_m = 1259 s_ss = -12 s_cc = -32 go = -500 ge = -210
H HH HHHHHH H H HHHH H H HHEHHHHHHHE
--MSAV--TESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVL
| :| *|| : || | . . | . :: .::| . || |||*.. .:
CGVFGIWGHEEAPQITYYGLHSLQHRGQEGAGIVATDGEKLTAHKGQGLITEVFQNGELS
EEEEEE HHHHHHHHHHHH GGG EEEEEEETTTTEEEEEE HHHH TTTTTT
HEH EEEEE HEEE HHHHHHHHHH HH E HHHHHHHHHHH
AIYNNPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLFIPQVRRWIEK
|.: .| | *| .|* | :* * . . .|** .: :. ||| |:
KVKGKGAIGH---VRYATAGGGGYENVQPLLFRSQNNGSLALAHNGN---LVNATQLKQQ
TTT EEEEE EE TTTT T GGG EEE TTTTT EEEEEEEE ETTHHHHHHH
HHHHH HHEEEEEHH EE EH HHHEHHHEH HHH HHH
LKAELRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKT------WKLAKNENV
*. | : .. .*| ||: . | *.. *:| *.| |:.* | ..| .
LENQGSIFQTSSDTEVLAHLIKRSGHFTLKDQIKNSLSMLKG---AYAFLIMTETEMIVA
HHHH HHHHHHHHHHH HHHHHHHHHH E EEEEEEETTTTEEEE
EE EEE EE HE H
SNPMQHYDLSEAPYYPDDLQSYWKGDPPK---EDLPDAEIVNLTPGTMLYLPRGLWHSTK
* . |** :. : . . :. || |:**|** | .: ||* .
LDPNGLRPLSIGMMGDAYVVASET-----CAFDVVGATYLREVEPGEMLIINDEGMKSER
ETTTTTTT EEEEETTEEEEETTH HHHHHH EEEEE TTTEEEEEETTEEEEEE
H HHEHHE HHHHHHHHHHHHHHHHHH HHHHHH H HHH H HH HHHHH
SDQATLALNITFGQPAWLDLMLAALRKKLISDNRFRELAVNHQSLHESSKSELNGYLESL
.: |
FSMNINRS....................................................
TTT
HHHH H HH EHH HHHHHHHHHHH
IQTLSENAETLTPEQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
...........................................
seq 1iciA 496 356 0.00 -100000.00 235 24
s_m = 1407 s_ss = 0 s_cc = 32 go = -600 ge = -420
H HHHHHHHH H H HHHH H H HHEHHHHHHHE
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARG----EVERFTSIPGFEKVRTLENVL
* .|.|: : |||*| .:|.* *** |* . .|**:* : .|* * :
.....GSHHHHHHGSHMDEKLLKTIAESKYLVA--LTGAGVSAESGIPTFRGKDGLWNRY
TTTTT T HHHHHHHHHTTTEEE EE GGGGGGG TTTTTTTTT
HEH EEEEE HEEE HHHHHHHHHH HH E HHHHHHHHHH
AIYNNPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDF-TDLFIPQVRRWIE
. *: | * *..||:** | *|| ||: | | || |
R--------------PEELANPQAFAKDPEKVWKWYAWRMEKVFNAQPNKAHQAFAELER
GGGTTTHHHHHH HHHHHHHHHHHHHHHHH HHHHHHHHHHH
HHHHHH HHEEEEEHH EE EH HHHEHHHEH HHHHH
KLKAELRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWK------------
: . * .| ||:| . *||. |. * | . . :. : |:
L-GVLKCLITQNVDDL-HERAGSRNVIHLHGSLRVVRCTSCNNSFEVESAPKIPPLPKCD
H TTEEEEEE HH HHHH TTTEEETTEEEEEEEETTT EEE TTTT TTT
H EE EEE
---------LAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGT
| |.| * . . . |. * ..:| . ..| . :|** . *
KCGSLLRPGVVWFGEMLPPDVLDRAMREVERADVIIVAGTSAVVQPAASLPLIVKQRGGA
TTT TEEEEE TTTT HHHHHHHHHHHH TTEEEEE TTTGGGHHHHHHHH E
EE HE HH HHEHHE HHHHHHHHHHHHHHHHHH HHHHHH H HHH
MLYLPRGLWHSTKSDQATLALNITFGQPAWLDLMLAALRKKLISDNRFRELAVNHQSLHE
|| | |.: |* .| *| .|| | ::| | :**.
IIEINPDETPLTPIADYSLRGKAGEVMDELVRHVRKALS.....................
EEEEETTTTTTGGGTTEEEE HHHHHHHHHHHHHHHH
H HH HHHHHHHHH H HH EHH HHHHHHHHHHH
SSKSELNGYLESLIQTLSENAETLTPEQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
........................................................
seq 1ckeA 495 355 0.00 -100000.00 236 18
s_m = 1212 s_ss = 11 s_cc = 132 go = -500 ge = -420
H HHHHHHHH H H HHHH H H
MSAVTESVLESIISPVTMSEFLEEYWPVKP-------LVARGEVERFTSI----------
|*| .| .*.| |.| || | |:.:| *
...MTAIAPVITIDGPSGAG----------KGTLCKAMAEALQWHLLDS-GAIYRVLALA
UU EEEEE TTTT HHHHHHHHHHHH EEEEH HHHHHHHHHH
HHEHHHHHHHEHEH EEEEE HEEE HHHHHHHHHH HH
-----PGFEKVRTLENVLAIYNNPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAAL
|.||||| *. . . . :: :: . ** ... .*| |. |:.**
ALHHHVDVASEDALVPLASHLDVRFVSTNGNLEVILEGEDVSGEIRTQEVANAASQVAA-
HHHH TTTTHHHHHHHHHH EEEEEETTEEEEEETTEETTTGGG HHHHHHHHHHH
E HHHHHHHHHHHHHHHH HHEEEEEHH EE EH HHHEH HH
EFDFTDLFIPQVRRWIEKLKAELRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLI---FQ
:*.**||||:. || : .. ||: | * . : |: :|| ||
--------FPRVREALLRRQRAF-----RELPGLIADGRDMGTVVFPDAPVKIFLDASSE
HHHHHHHHHHHHH TTTTEEEEETT TTTTTEEEEEE HH
EH HHHHHH EE EEE E
IQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTM
| .||.|: : .. *. : . : .* . . : .* |*: || *|| ||
ERAHRRMLQLQVKGFSVNFERLLAEIKERDDRDRNRAVAPLVPAADALVLDSTTLSIEQV
HHHHHHHHHHHHH HHHHHHHHHUUUUUUUUUUUUU TTTTEEEETTTTTHHHH
E HE HH HHEHHE HHHHHHHHHHHHHHHHHH HHHHHH H HHH
LYLPRGLWHSTKSDQATLALNITFGQPAWLDLMLAALRKKLISDNRFRELAVNHQSLHES
| | .|||| || .
IEKALQYARQKLALA.............................................
HHHHHHHHHHHH
H HH HHHHHHHHH H HH EHH HHHHHHHHHHH
SKSELNGYLESLIQTLSENAETLTPEQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
.......................................................
seq 1i2oA 495 369 0.00 -100000.00 321 39
s_m = 1446 s_ss = -42 s_cc = 286 go = -800 ge = -440
H HHHHHHHH H H HHHH H H HHEHHHHHHHEHEH
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYN
|: |*| :.|. |.. || | . | :* * : |:: || ::|* *.. .
.TDKLTSLRQYTTVVADTGDI-AAMKLYQPQDATTNPSLILNAAQIPEYRKLIDDAVAWA
THHHHHHTTTEEEEE H HHHHHH EEE HHHHHHHH GGGHHHHHHHHHHH
EEEEE HEEE HHHHHHHHHH HH E HHHH HHHHHHHHH
NPVMVVGDAVIEESE-GITDRFLVSPAEALEWYEKGAALEFDFTDLFIPQ-VRRWIEKLK
: . : :*. : : . *|*| . . || |*| :. :| |:| .:|*.
KQQSNDRAQQIV---DATDKLAVNIGLEILKLVPGRISTAVDARLSYDTEASIAKAKRLI
HHH HHHHHH HHHHHHHHHHHHHHHH EEEE GGGTTTHHHHHHHHHHHH
HHH HHEEEEEHH EE EH HHHEH HHEH HHHH
AELRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLI----------FQIQGEKTW------
: . ..| ||| .* : .*:.* :.. * .*|.
KLYNDAGISNDRILIKLASTWQGIRAAEQLEKEGINCNLTLLFSFAQARA----CAEAGV
HHHHHH GGGEEEEEETTHHHHHHHHHHHHH EEEEEE HHHHHH HHHH
HH EE E
--------KLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDL--------PDAE
.||.| ..| . *|. *:* . . |.*.:: : . *
FLISPFVGRILDWYKANTDKKEYAPAEDPGVVSVSEIYQYYKEHGYETVVMGASFRNIGE
EEEETHHHHHHHHHHH GGG HHHHHHHHHHHHHHHH EEEET HHH
EE EE HE HH HHEHHE HHHHHHHHHHHHHHHHHH
IVNLTPGTMLYLPRGLWHSTKSDQATLALNITF-----GQPAWLDLMLAALRKKLISDNR
* * ||* ||| *:.: .:.:. | |.: |:** || |: *:
ILELAGCDRLTIAPALLKELAESEGAIERKLSYTGEVKARPARITESEFLWQ--HNQDPM
HHHTTTTTEEEE HHHHHHHHH T HHHHHHH HHTTHH
HHHHHH H HHH H HH HHHHHHHHH H HH EHH HHHHHH
FRELAVNHQSLHESSKSELNGYLESLIQTLSENAETLTPEQIFQSQDSDFDPYQSTQLVF
:|. .|: .| .* . |.:*|
AVDKLAEGIRKFAIDQEKLEKMIGDLL.................................
HHHHHHHHHHHHHHHHHHHHHHHHH
HHHHH
RQLLTSYKF
.........
seq 1gcvA 494 352 0.00 -100000.00 139 13
s_m = 1290 s_ss = 0 s_cc = 108 go = -700 ge = -250
H HHHHHHHH H H HHHH H H HHEHHHHHHHEH
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPG---FEKVRTLENVLA
. | :||: * ||:||: : |
.................................AFTACEKQTI--GKIAQVLAKSPEAYG
HHHHHHH HHHHHHHHH HHHHH
EH EEE EE HEEE HHHHHHHHHH HH E HHHHHHHH
IYNNPVMV----VGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLFIPQVRRW
.| | . || :*: :: |..| *. .|: * .: | |||:| ||| :
AEC-----LARLFVTHPGSKSYFEYKDYSAAGAKVQVHGGKVIRAVVKAAEH-VDDLHSH
HHH HHHHHHH GGGGTTT TTTTTTTTHHHHHHHHHHHHHHHHHHHH TTTHHHH
HHHHHHHH HHEEEEEHH EE EH HHHEHHHEH HH
IEKLKAELRLPAGTSS--------KAIVYAAKNG-GGFKAH----FDAYTNLIFQIQGEK
.*|* *|.|: || ||*|:. |.. | *:|. |* . : *.*: :||
LETL-ALTHGKKLLVDPQNFPMLSECIIVTLATHLTEFSPDTHCAVDKLLSAICQELSSR
HHHH HHHHHHH HHHHHHHHHHHHHHHHHTTTT HHHHHHHHHHHHHHHHHHHTT
HHHH EE EEE EE
--TWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYL
YR..........................................................
T
HE HH HHEHHE HHHHHHHHHHHHHHHHHH HHHHHH H HHH H
PRGLWHSTKSDQATLALNITFGQPAWLDLMLAALRKKLISDNRFRELAVNHQSLHESSKS
............................................................
HH HHHHHHHHH H HH EHH HHHHHHHHHHH
ELNGYLESLIQTLSENAETLTPEQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
....................................................
seq 1jvr_ 493 337 0.00 -100000.00 135 9
s_m = 815 s_ss = 46 s_cc = -52 go = -300 ge = -120
H HHHHHHHH H H HHHH H H HHEHHHHHHHEHEH
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYN
............................................................
EEEEE HEEE HHHHHHHHHH HH E HHH HHHHHHH
NPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLFIP-----QVRRWIE
.: .. .. .* . . .| | | |: : * | || :
...........HMGQIHGLSPTPIPKAPRGLSTHHWLNFLQAAYRLQPGPSDFDFQQLRR
TTTTTTTTTTT TTTTTTTTTHHHHHHHHHHHHH TTTTTT HHHHHHH
HHHHHH HHEEEEEHH EE EH HHHEHHHEH HHHHHH
KLKAELRLPAGTSS-KAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPM
** * * |.|. : ::*. .*:| :| *|||| *.. |....| *
FLKLALKTPIWLNPIDYSLLASLIPKGYPGRVVEIINILVKNQVSP-----SAPAAPVPT
HHHHHHHTTTTTTTT GGGHHHH TTTT HHHHHHHHHHHTTT TTTTTTTT
EE E EE EE HE HH HHEH
QHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAE-IVNLTPGTMLYLPRGLWHSTKSDQATL
: : .:|* * | . : :* :*. : |
PICPTTTPPPPPPPSPEAHVPPPYVEPTTTQCF...........................
T TTT TTTTTTT
HE HHHHHHHHHHHHHHHHHH HHHHHH H HHH H HH HHHHHHHHH H
ALNITFGQPAWLDLMLAALRKKLISDNRFRELAVNHQSLHESSKSELNGYLESLIQTLSE
............................................................
HH EHH HHHHHHHHHHH
NAETLTPEQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
.....................................
seq 1jpnA 488 338 0.00 -100000.00 93 12
s_m = 573 s_ss = 77 s_cc = 252 go = -300 ge = -160
H HHHHHHHH H H HHHH H H HHEHHHHHHHEHEH
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYN
............................................................
EEEEE HEEE HHHHHHHHHH HH E HHHHHHHHHHHHHHH
NPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLFIPQVRRWIEKLKAE
............................................................
H HHEEEEEHH EE EH HHHEHHHEH HHHHHH
LRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLS
............................................................
EE EEE EE HE HH HHEHHE
EAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLPRGLWHSTKSDQATLALNITFG
...........................................................M
HHHHHHHHHHHHHH HHHH HHHHHH H HHH H HH HHHHHHHHH H
QPAWLDLMLAALRKKL------ISDNRFRELAVNHQSLHESSKSELNGYLESLIQTLSEN
|| .| | :*|:| *||. .||. ||. .* |:||||.|.*
FQQLSARLQEAIGR--LRGRGRITEEDLKATLREIRRALMDADVNLEV-ARDFVERVREE
HHHHHHHHHHHHH TTTT HHHHHHHHHHHHHHHHHH HHH HHHHHHHHHHH
HH EHH HHHHHHHHHHH
AETLTPEQIFQSQDSDFDPYQSTQLVFRQLLTSYK--F
*.. || || |* | |: ||.: *::.
ALG-------KQVLESLTPAEVILATVYEALKEALGG.
HHH H GGGTTTHHHHHHHHHHHHHHHHH
seq 1ner_ 487 334 0.00 -100000.00 73 10
s_m = 683 s_ss = 17 s_cc = 52 go = -200 ge = -100
H HHHHHHHH H H HHHH H H HHEHHHHHHHEHEH
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYN
............................................................
EEEEE HEEE HHHHHHHHHH HH E HHHHHHHHHHHHHHH
NPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLFIPQVRRWIEKLKAE
:.:| ||| |:| *:
.....................................CSNEKARDWHR------ADVIAG
TTTT H HHHHHH
H HHE EEEEHH EE EH HHHEHHHEH HHHHHH
LRLPAGTSSKAI----VYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQH
*: .||.*||: :. | . *| | |*..: | * |.||| . .
LKKRKLSLSALSRQFGYAPTTLANALERHWPKGEQIIANALETKPEVIWPSRYQAGE...
HHTTT HHHHHHHH HHHHHGGG HHHHHHHHHHH GGGTTTTTTTTT
EE EEE EE HE HH HHEHHE
YDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLPRGLWHSTKSDQATLALN
............................................................
HHHHHHHHHHHHHHHHHH HHHHHH H HHH H HH HHHHHHHHH H
ITFGQPAWLDLMLAALRKKLISDNRFRELAVNHQSLHESSKSELNGYLESLIQTLSENAE
............................................................
HH EHH HHHHHHHHHHH
TLTPEQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
..................................
seq 1qg6A 486 342 0.00 -100000.00 263 24
s_m = 1166 s_ss = 7 s_cc = 122 go = -600 ge = -290
H HHHHHHHH H H HHHH H H HHEHHHHHHHEHEH
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYN
............................................................
EEEEE HEEE HHHHHHHHHH HH E HHHHHHHHHHHHH
NPVMVVGDAVIE-ESEGITDRFLVSPAEALEWYEKGAALEFDFTDL-FIPQVRRWIEKLK
:.||. | *. |. .. | * .: ** *.* ::| .|.*.||:||*
...GFLSGKR--ILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLG
TTTTTTE EEE TTTTHHHHHHHHHHHH EEEEEE HHHHHHHHHHHHHH
HHH HHEEEEEHH EE EH HHHEHHHEH HHHHHH
AELRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYD
.:.*|. |:* | | | : ||..|||:| * * .: . : .|
SDIVLQCDVAEDASIDTMFA--ELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFK
EEE TTTTHHHHHHHHH HHHHHTTTEEEEEE GGG HHHH HHHHH
EE EEE EE HE HH HHEHHE
LSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTP-GTMLYLPRGLWHSTKSDQATLALNI
| : : .|.|:. | |* * . ..|.|.: |.:|*|
IAHDISSYSFVAMAKACRSMLNP-----------GSALLTLSYLGAERAIPNYNVMGLAK
HHHHHHHHHHHHHHHHHGGGEEE EEEEEEEE GGG TTTHHHHHHHH
HH HHHHHHHHHHHHHHHH HHHHHH H HHH H HH HHHHHHHHH H
TFGQPAW--LDLMLAALRKKLISDNRFRELAVNHQSLHESSKSELNGYLESLIQTLSENA
| :.|: .| .|| ..|* | .| |. ..*. . : : | . . .
A------SLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIR
H HHHHHHHHHHHHHGGG EEEEEEE GGGGGTTTHHHHHHHHHHHTTTT
HH EHH HHHHHHHHHHH
ETLTPEQIFQ------SQDSDFDPYQSTQLVFRQLLTSYK-F
* *|*.|.: * |*:| . | : | |.: :
RTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIAAMNE.
HHHHHHHHHHHH GGGTTTTTTEEEETTTTTTTTTT
seq 1jy8A 486 348 0.00 -100000.00 121 9
s_m = 882 s_ss = -7 s_cc = 110 go = -300 ge = -240
H HHHHHHHH H H HHHH H H HHEHHHHHHHEHEH
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYN
.| *|*| |
..............................................MRIGHGFDVHAFGG
EEEEEEEEEEEEE
EEEEE HEEE HHHHHHHHHH HH E HHHH
NPVMVVGDAVIEESEGITDRFLVSPAEALEWYEK--------GAALEFDFTDLFIPQ---
: || |*| *. ..* || | * *| :|.:| *|
EGPIIIGGVRIPYEKGLLAHSDGDVA--------LHALTDALLGAAALGDIGKLFPDTDP
E EEETTEEE TTEEEETTTTT HH HHHHHHHHHHHH HHHH TTTTG
HHHHHHHHHHHH HHEEEEEHH EE EH HHHEHHHEH HHHHH
------VRRWIEKLKAELRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWK
|*|||:| : :| .|*| .| *. || . |||* |.: :.* || *
AFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLG-----
GGTTT HHHHHHHHHHHHHHH EEEEEEEEE GGGHHHHHHHHHHHH
H EE EEE EE
LA-KNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLPRGL
:|.:*. . | .. .. . . |: . |
--CHMDDVNVKATTTEKLGFTGRGEGIACEAVALLI........................
GGGEEEEEE TTTTTTTTTT EEEEEEEEEE
HE HH HHEHHE HHHHHHHHHHHHHHHHHH HHHHHH H HHH H HH
WHSTKSDQATLALNITFGQPAWLDLMLAALRKKLISDNRFRELAVNHQSLHESSKSELNG
............................................................
HHHHHHHHH H HH EHH HHHHHHHHHHH
YLESLIQTLSENAETLTPEQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
................................................
seq 1c4zD 485 341 0.00 -100000.00 147 11
s_m = 971 s_ss = 13 s_cc = 52 go = -500 ge = -140
H HHHHHHHH H H HHHH H H HHEHHHHHHHEHEH
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYN
............................................................
EEEEE HEEE HHHHHHHHHH HH E HHHHHHHHHHHHHHH
NPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLFIPQVRRWIEKLKAE
............................................................
H HHEEEEEHH EE EH HHHEHHHEH HHHHHH
LRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLS
| |* || .: .| |. .:. | :
...............................MAASRRLMKELEEIR-KCGMKNFRNIQVD
UUU HHHHHHHTTT T TTTEEEETTT
EE EE E EE HE HH HHEHHE
EAPYYPDDLQSYWKGDPPKEDLPDAEI-----VNLTPGTMLYLPRGLWHSTKSDQATLAL
** |:.:..* .. . :** | :|* .| :|.| |* | .:. | *
EANLLTWQGLIVPDNPPYDKGAFRIEINFPAEYPFKPPKITFKTK-IYHPNIDEKGQVCL
T TTTEEEEEE TTTTTT EEEEEE TTTTTTTT EEEETTT TTTTTTTTTT T
HH HHHHHHHHHHHHHHHH HHHHHH H HHH H HH HHHHHHHH
NITFGQPAW-----LDLMLAALRKKLISDNRFRELAVNHQSLHESSKSELNGYLESLIQT
|| :::|.* :* | .*..|||: |. . * . :|.:|.:..:. |*..||
PV-ISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKK
TT TTTTTTTTTT HHHHHHHHHHHHH TTTTTTHHHHHHHHHTTTTTHHHHHHHHHH
H H HH EHH HHHHHHHHHHH
-LSENAETLTPEQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
Y........................................
seq 451c_ 485 330 0.00 -100000.00 81 0
s_m = 396 s_ss = -4 s_cc = 40 go = 0 ge = 0
H HHHHHHHH H H HHHH H H HHEHHHHHHHEHEH
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYN
............................................................
EEEEE HEEE HHHHHHHHHH HH E HHHHHHHHHHHHHHH
NPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLFIPQVRRWIEKLKAE
............................................................
H HHEEEEEHH EE EH HHHEHHHEH HHHHHH
LRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLS
............................................................
EE EEE EE HE HH HHEHHE
EAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLPRGLWHSTKSDQATLALNITFG
. | : *| *||* .. :
.....................................EDPEVLFKNKGCVACHAIDTKMV
HHHHHHHH GGG TTTTTTT
HHHHHHHHHHHHHHHHHH HHHHHH H HHH H HH HHHHHHHHH H H
QPAWLDLMLAALRKKLISDNRFRELAVNHQSLHESSKSELNGYLESLIQTLSENAETLTP
**|.*| ... .||: .: : :*: | : | *: |: |***:| : :|
GPAYKDVAAKFAGQAGAEAELAQRIKNGSQGVWGPIPMPPNAVSDDEAQTLAKWVLSQK.
TT HHHHHHHHTTTTTHHHHHHHHHHH EETTTT EE HHHHHHHHHHHHH
H EHH HHHHHHHHHHH
EQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
..............................
seq 3mddA 482 360 0.00 -100000.00 239 30
s_m = 1459 s_ss = -1 s_cc = 118 go = -700 ge = -430
H HHHHHHHH H H HHHH H H HHEHHHHHHH
MSAVTESVLESIISPV---TMSEFLEEYWPVKPLVARGEVERF--TSIPGFEKVRTLENV
||::: * :. *|.|*:|*| |. .::| *: | || || |..
..GFSFELTEQQKE--FQATARKFAREE-------IIPVAAEYDRTGEYPVPLLKRAWEL
HHHHH HHHHHHHHHHHH HHHHHHHHHHH TTHHHHHHHHHH
EHEH EEEEE HEEE H HHHHHHHHH HH E HHHHHHH
LAIYNNPVMVVGDAVIEESEGITDRFLVSP---AEALEWYEKGAALEFDFTDLFIPQVRR
. .| |*| |.. *:*:: *| . :: ..*:. ||:
GLMNTHIPESFGGLGLGIIDS---------CLITEELAYGCTGVQTAIEANTLGQVPLII
TTTTTT GGG HHHH HHHHHHHHHH HHHHHHHHHHHHHHHHHHH
HHHHHHHHH HHEEEEEHH EE EH HHHEHHH EH HHHHHH
WIEKLKAELRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQ------IQGEKTWKLAK
. .| | : * |*.:|:||..| : *:| : .| | | * *|* * :
GGNYQQQKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNG
H HHHHHHHHHHHH TTT EEEE TTTTTTTGGG EEEEETTEEEEEEEEEEEETT
EE EEE EE
NENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTP--------GTMLY-
: :. . ..|. . :.... |.. | : ||| ||| |
GKANWYFLLARSDPDPKAPASKAFTGFIVEADTPGVQIGRKEIN--MGQRCSDTRGIVFE
TTTTEEEEEEE TTTTTTTTTEEEEEEETTTTTEEEEEE TTTTTT EEEEEEE
H E HH HHEHHE HHHHHHHHHHHHHHHHHH HHHHHH H
---LPRGLW----HSTKSDQATLALNITFGQPAWLDLMLAALRKKLISDNRFRELAVNHQ
|*:.||
DVRVPKENVLTGE...............................................
EEEEEGGGTTTTT
HHH H HH HHHHHHHHH H HH EHH HHHHHHHHHHH
SLHESSKSELNGYLESLIQTLSENAETLTPEQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
............................................................
seq 1c1dA 481 342 0.00 -100000.00 191 16
s_m = 1322 s_ss = -22 s_cc = 208 go = -800 ge = -290
H HHHHHHHH H H HHHH H H HHEHHHHHHHEHEH
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYN
............................................................
EEEEE HEEE HHHHHHHHHH HH E HHHHHHHHHHHHHHH
NPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLFIPQVRRWIEKLKAE
............................................................
H HHEEEEEHH EE EH HH HEHHHEH HHHHHH
LRLPAGTSSKAIVYAAKNGGGFKAHFDAYT--NLIFQIQGEKTWKLAKNEN-VSNPMQHY
:.|| :.|.*| : * ||||. |||*| *| |.**: . :*
SAFTTAVGVFEAMKATVAHRG----LGSLDGLTVLVQGLGAVGGSLASL--AAEAGAQLL
HHHHHHHHHHHHHHHHHHHH TTTTEEEEE HHHHHHHHH HHHH EEE
EE EEE EE HE HH H HEHHE
DLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLPRGLWHSTKSDQ-ATLALN
..|: :| . :..**||... |: *| * | || .| : | :
VADTDTERVAHAVALGHTAVALEDVLSTPCDVFAPCAMGGV----ITTEVARTLDCSVVA
EETTTHHHHHHHHHH EE GGGTTTT TTEEEE TT TTHHHHHH EE
HHHHHHHHHHHHHHHHHH HHHH HH H HHH H HH HHHHHH
ITFGQPAWLDLMLAALRKKLISDNRFREL------AVNHQSLHES--SKSELNGYLESLI
| || |.|.:.*:|. * .| : *: || .|.. *:*::| .:|:||
GAANNVIADEAASDILHARGILYAPDF--VANAGGAIHLVGREVLGWSESVVHERAVAIG
TTTTT HHHHHHHHHH EE HH HHHHHHHHHHHHHHHH HHHHHHHHHHHH
HHH H HH EHH HHHHHHHHHHH
QTLSENAETLTPEQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
|** | *.: || | |*..:..|| | |.. .
DTLNQVFEISDNDGV--------TPDEAARTLAGRRAREAS.
HHHHHHHHHHHHH HHHHHHHHHHHHHHHH
seq 1irdA 481 352 0.00 -100000.00 143 18
s_m = 1458 s_ss = -1 s_cc = 170 go = -900 ge = -290
H HHHHHHHH H H HHHH H H HHEHHHHHHHEHEH
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYN
.| ..: ::|.|. ||**:. | .|.|.
..............................VLSPADKTNVKAA--WGKVGAHAGEYGAEA
HHHHHHHHHH HHH GGGHHHHHHHH
EEE EE HEEE H HHHHHHHHH HH E HHHHHHHHH
NPVMV----VGDAVIEESEGITDRFLVSP--AEALEWYEKGAALEFDFTDLFIPQVRRWI
| . || :.| |||*|:*| * | || * *| | ||||| ||| | :
-----LERMFLSFPTTKTY--FPHFDLSHGSAQVKGHGKKVADALTNAVAH-VDDMPNAL
HHHHHHH GGGGGG TTTT TTTTHHHHHHHHHHHHHHHHHHHH TTTHHHHH
HHHHHHH HHEEEEEHH EE EH HHHEHHHEH HH
EKLKAELRLPAGTSS--------KAIVYAAKN--GGGFKAH----FDAYTNLIFQIQGEK
||* ||*|: || ||||.. |. ||.*|| |* : |: | :|*
SAL-SDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSK
HHH HHHHHHH HHHHHHHHHHHHHHHHHH GGGTTHHHHHHHHHHHHHHHHHHHTT
HHHH EE EEE EE
--TWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYL
YR..........................................................
T
HE HH HHEHHE HHHHHHHHHHHHHHHHHH HHHHHH H HHH H
PRGLWHSTKSDQATLALNITFGQPAWLDLMLAALRKKLISDNRFRELAVNHQSLHESSKS
............................................................
HH HHHHHHHHH H HH EHH HHHHHHHHHHH
ELNGYLESLIQTLSENAETLTPEQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
....................................................
seq 1fxzA 480 338 0.00 -100000.00 174 7
s_m = 1532 s_ss = -131 s_cc = -72 go = -400 ge = -420
H HHHHHHHH H H HHHH H H HHEHHHHHHHEHEH
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYN
............................................................
EEEEE HEEE HHHHHHHHHH HH E HHHHHHHH
NPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDF-------TDLFIPQVRRW
||: :|: |* ** : :
..................................ICTMRLRHNIGQTSSPDIYNPQAGSV
TTTT EEE TTTT TTEEETTTEEE
HHHHHHHH HHEEEEEHH EE EH HHHEHHHE H HHHHHH
IEKLKAELRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQI-QGEKTWKLAKNENVSN
:|.| .|.. * :. : :|| * |*| * *| | :* . || ... .
TTATSLDFPALSWLRLSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNGERV
EEETTTTTGGGTTTT EEEEEEETTTEEEEEEEETTT EEEEEEE EEEEEEETTTT EE
EE EEE EE HE HH HHE
PMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLPRGLWHSTKSDQAT
:: *:|*||* |*:||:| :* :.
FDGE---------------------------------LQEGRVLIVPQNFVVAARSQSDN
EEEE EETTEEEEETTTTEEEEEE TTT
HHE HHHHHHHHHHHHHHHHHH HHHHHH H HHH H HH HHHHHHHHH
LALNITFGQPAWLDLMLAALRKKLISDNRFRELAVNHQSLHESSKSELNGYLESLIQTLS
. : ||* : | : * *|:|:| :..: : :. .| .. .* :. | . .
FEY-VSFKTNDTPMIGTLAGANSLLNALPEEVIQHTFNLKSQQARQIKNNNPFKFLVPPQ
EEE EEEE TTTT EEE TTTTGGGG HHHHHHHH HHHHHHHHHH TTTEE
H HH EHH HHHHHHHHHHH
ENAETLTPEQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
*.
ES....................................
seq 1fqiA 478 346 0.00 -100000.00 151 21
s_m = 803 s_ss = 42 s_cc = 230 go = -400 ge = -270
H HHHHHHHH H H HHHH H H HHEHHHHHHHEHEH
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYN
............................................................
EEEEE HEEE HHHHHHHHHH HH E HHHHHHHHHHHHHHH
NPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLFIPQVRRWIEKLKAE
............................................................
H HHEEEEEHH EE EH HHHEHHHEH HHHHHH
LRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLS
............................................................
EE EEE EE HE HH HHEHHE
EAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLPRGLWHSTKSDQATLALNITFG
|. : :. :|:|. . |:* | | :| |:*: .| *
.......QFWDLNAKLVDIPTKMRVERWAFN-----------FSELIRDPKGRQSFQHFL
UUUUUUU GUGGGGGG HHHHHH HHHHHHHHHHH
HHHHHHHHHHHHHH HHHH HHHHHH H HHH H HH HHHHHHHH
QPAWLDLMLAALRKKL------ISDNRFRELAVNHQSLHESSKS----ELNGYLESLIQT
|. : *|:| : || | :*.* : * ||:.| .|.*.. ::|::
RKEFSGENLGFWEA--CEDLKYGDQSKVKEKAEEIYKLFLAPGARRWINIDGKTMDITVK
HHH HHHHHHHHH HHHHHH TTTHHHHHHHHHHHHHHTTTTTTT TTTTUHHHHH
H H HH EHH HHHHHHHHHHH
LSENAETLTPE----QIFQSQDSDFDPYQSTQLVFRQLLTSYK--F
.:... : | .*.: |::* | | ||:.:*:: .
GLKHPHRYVLDAAQTHIYMLMKKDSYARYLKSPIYKEMLAKAIEP.
HHTTTTTTTHHHHHHHHHUTUTTTHHHHHHH HHHHGUGGG
seq 1eexG 473 335 0.00 -100000.00 174 3
s_m = 663 s_ss = -8 s_cc = -30 go = -200 ge = -60
H HHHHHHHH H H HHHH H H HHEHHHHHHHEHEH
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYN
............................................................
EEEEE HEEE HHHHHHHHHH HH E HHHHHHHHHHHHHHH
NPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLFIPQVRRWIEKLKAE
............................................................
H HHEEEEEHH EE EH HHHEHHHEH HHHHHH
LRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLS
*..|| ||: | .*** : .|:* .:. * .
................MNTDAIESMVRDVLSRMNSLQGEAPAAAPAAGGASRSARVSDYP
UUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUU GGGTT
EE EEE EE HE HH HHEHHE
EAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLPRGLWHSTKSDQATLALNITFG
*: .*. |: . | .. |* . |*| |* * * || :. ||
LANKHPEWVKTATNKTLDDFTLENVLSNKVTAQDMRITPETLRLQASIAKDAGRDRLAMN
HHHH GGG TTTTT TGGGTTHHHHHHTTTTGGGTT HHHHHHHHHHHHHH HHHHHH
HHHHHHHHHH HHHHHHHH HHHHHH H HHH H HH HHHHHH HHH H
QPAWLDLMLAAL---RKKLISDNRFRELAVNHQSLHESSKSELNGYLESLI--QTLSENA
.|.*| .|.|:: .... |:.: : :| ::* |. * : | * *
FERAAELT----AVPDDRILEIYNALRPYRSTKEELLAIADDLESRYQAKICAAFVREAA
HHHHHHHH HHHHHHHHHHHTTTT HHHHHHHHHHHHHHHTTHHHHHHHHHHH
HH EHH HHHHHHHHHHH
ETLTPEQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
|.: |:. :.. *
TLYVERKKLKGDD......................
HHHHHH TTTT
seq 1dgsA 472 332 0.00 -100000.00 194 22
s_m = 1089 s_ss = -45 s_cc = 228 go = -600 ge = -230
H HHHHHHHH H H HHHH H H HHEHHHHHHHEHEH
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYN
............................................................
EEEEE HEEE HHHHHHHHHH HH E HH HHHHHHHHHHHH
NPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLFI-PQVRRWIEKLKA
| |:| * : * .
........................................RWPEA--CPECGHRLVKEGK
T TTTTT T T TTT
HH HHEEEEEHH EE EH HHHEHHHEH HHHH HH
ELRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTW-KLAKNENVSNPMQHYD
..*|*: . || *: *| | |.: ||| *** | |*:: . * .|:. *
VHRCPNPLCPAKRFEAIR-------HYASRKAMDIEGLGEKLIERLLEKGLVRDVADLYH
T T TTTTGGGHHHHHH HHHTTTTTTTTTTTHHHHHHHHHHTTTT GGGGGG
EE EEE EE HE HH HHEHHE
LSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLPRGLWHSTKSDQATLALNIT
*:.. : .| . |: : . | | .| : * .. ** | | |. ** |||
LRKEDLLGLERMGEKSAQNLLRQIEESKH---RGLERLLYALGLPGVGEVLARNLARRFG
TTTGGGTTTTTT HHHHHHHHHHHHHH HHHHHHHH TTTT HHHHHHHHHHTT
HHHHHHHHHHHHHHHHHH HHHHHH H HHH H HH HHHHHHHHH H
FGQPAWLDLMLAALRKKLISDNRFRELAVNHQSLHESSKSELNGYLESLIQTLSENAETL
.* |* * | **| . ** :||: |.||| |.::*|| *.* .
T-----MDRLLEASLEELIEVEEVGELTARAILETLKDP-----AFRDLVRRLKEAGVSM
T HHHHH HHHHHHTTTT HHHHHHHHHHHH H HHHHHHHHHHHH
HH EHH HHHHHHHHHHH
TPEQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
.:
ESK.............................
T
seq 1eijA 469 335 0.00 -100000.00 72 3
s_m = 585 s_ss = -8 s_cc = 118 go = -200 ge = -50
H HHHHHHHH H H HHHH H H HHEHHHHHHHEHEH
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYN
............................................................
EEEEE HEEE HHHHHHHHHH HH E HHHHHHHHHHHHH
NPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFT--DLFIPQVRRWIEKLK
:: | | | : ..*:|*| :|:*:
...............................MRQQLEMQKKQIMMQILTPEARSRLANLR
TTTTTTT HHHHHTTT HHHHHHHHHHH
HHH HHEEEEEHH EE E H HHHEHHHEH HHHHHH
AELRLPAGTSSKAIVYAAKNGGGFKAHF---DAYTNLIFQIQGEKTWKLAKNENVSNPMQ
: :.:|.|| .*::*: | ||: *| ||.*|*
LTRPDFVEQIELQLIQLAQMGRVRSK--ITDEQLKELLKRVAGKK...............
TTTHHHHHHHHHHHHHHHH TTTT HHHHHHHHHHH
EE EEE EE HE HH HHEHHE
HYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLPRGLWHSTKSDQATLAL
............................................................
HHHHHHHHHHHHHHHHHH HHHHHH H HHH H HH HHHHHHHHH H
NITFGQPAWLDLMLAALRKKLISDNRFRELAVNHQSLHESSKSELNGYLESLIQTLSENA
............................................................
HH EHH HHHHHHHHHHH
ETLTPEQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
...................................
seq 1b79A 466 333 0.00 -100000.00 121 8
s_m = 550 s_ss = 23 s_cc = 182 go = -300 ge = -80
H HHHHHHHH H H HHHH H H HHEHHHHHHHEHEH
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYN
............................................................
EEEEE HEEE HHHHHHHHHH HH E HHHHHHHHHHHHHHH
NPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLFIPQVRRWIEKLKAE
............................................................
H HHEEEEEHH EE EH HHHEHHHEH HHHHHH
LRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLS
............................................................
EE EEE EE HE HH HHEHHE
EAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLPRGLWHSTKSDQATLALNITFG
.:: | * |*| ** .| *| *: |
......................MASHMERDPQVAGLKVPP---HSIEAEQSVLGGLML--
UUUUUUUUUUUUUUUU HHHHHHHHHHHHH
HHHHHHHHHHHHHHHHHH HHHHHH H HHH H HH HHHHHHHHH H H
QPAWLDLMLAALRKKLISDNRFRELAVNHQSLHESSKSELNGYLESLIQTLSENAETLTP
:|: :* | |.: : : ..*.|| :.*|**:. .:* :.||. . |. |
DNERWDDVAERVVADDFYTRPHRHIFTEMARLQESGSPIDLITLAESLERQGQLDSVGGF
TTTHHHHHHH GGG HHHHHHHHHHHHHHH HHHHHHHHHH GGGG HH
H EHH HHHHHHHHHHH
E---QIFQSQDSDFDPYQSTQLVFRQLLTSYKF
| :|||. * : : .:|*
AYLAELSKNTPSAANISAYADIVRE........
HHHHHHHHH TTTT HHHHHHHHH
seq 1a0p_ 465 333 0.00 -100000.00 98 3
s_m = 495 s_ss = 68 s_cc = -50 go = -100 ge = -30
H HHHHHHHH H H HHHH H H HHEHHHHHHHEHEH
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYN
............................................................
EEEEE HEEE HHHHHHHHHH HH E HHHHHHHHHHHH
NPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGA---ALEFDFTDLFIPQVRRWIEKL
|*|. ||.|. | * | ||.|. || ||:* *
......................QDLARIEQFLDALWLEKNLAENTLNAYRRDLSMMVEWL
HHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHHHH
HHHH HHEEEEEHH EE EH HHHEHHHEH HHHHHH
KAELRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHY
: : * . *| | .| | ... | : :| *| |.| || | : |.*::*.
HHRGLTLATAQSDDLQALLAERLEGGYKATSSARLLSAVRRLFQYLYREKFREDDPSAHL
HHH TTTTT HHHHHHHHHTTTUUUUUUU HHHHHHHHHHHHHHHHHHTTTT TTTTTT
EE EEE EE HE HH HHEHHE
DLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLPRGLWHSTKSDQATLALNI
............................................................
HHHHHHHHHHHHHHHHHH HHHHHH H HHH H HH HHHHHHHHH H
TFGQPAWLDLMLAALRKKLISDNRFRELAVNHQSLHESSKSELNGYLESLIQTLSENAET
............................................................
HH EHH HHHHHHHHHHH
LTPEQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
.................................
seq 1hskA 464 337 0.00 -100000.00 165 5
s_m = 905 s_ss = -10 s_cc = -64 go = -300 ge = -70
H HHHHHHHH H H HHHH H H HHEHHHHHHHEH
MSAVTESVLESIISPVTMSEFLEEYWPVKP---LVARGEVERFTSIPGFEKVRTLENVLA
|:||. | | . || . : | |: | * | | | | *|*: | |
..PINKDIYQALQQLIPNEKIKVDEPLKR-YTYTKTGGNADFYITPTKNEEVQAVVKYAY
UUHHHHHHHHHHH GGGEEEEEETTT TTTTT EEEEEE HHHHHHHHHHHH
EH EEEEE HEEE HHHHHHHHHH HH E HHHHHHHHHHH
IYNNPVMVVG-DAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLFIPQVRRWIEK
. **| .* |: *. .**::| . * : .| *|.:|. |* :*|: ||
QNEIPVTYLGNGSNIIIREGGIRGIVISLLSLDHIEVSDDAIIAGSGAAIIDVSRVARDY
HH EEEETTTTTTEETTTTEEEEEEETTTTT EEEETTEEEEETTTTHHHHHHHHHHH
HHHHH HHEEEEEHH EE EH HHHEHHHEH HHHHHH
LKAELRLPAGTSSKAIVYAAKNGGGFKAHFDA--YTNLIFQIQGEKTWKLAKNENVSNPM
* ::* | : |.*:*|||. ..| | :*|| **: .| * . :..
ALTGLEFACGIPGSIGGAVYMNAGAYGGEVKDCIDYALCVNEQGSLIKLTTKELELDYRN
EETTGGGTTT THHHHHHH EETTEEGGG EEEEEEETTTT EEEEE GGG TTTT
EE EEE EE HE HH HHEH
QHYDLSEAPYYPDDLQSY-WKGDPPKEDLPDAEIVNLTPGTMLYLPRGLWHSTKSDQATL
. ... :.
SIIQKEHLVVLEAAFTLAP.........................................
HHHHH EEEEEEEE EE
HE HHHHHHHHHHHHHHHHHH HHHHHH H HHH H HH HHHHHHHHH H
ALNITFGQPAWLDLMLAALRKKLISDNRFRELAVNHQSLHESSKSELNGYLESLIQTLSE
............................................................
HH EHH HHHHHHHHHHH
NAETLTPEQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
.....................................
seq 1jpdX 464 340 0.00 -100000.00 213 10
s_m = 1276 s_ss = -53 s_cc = 108 go = -700 ge = -170
H HHHHHHHH H H HHHH H H HH EHHHHHH
MSAVTESVLE--SIISPVTMSEFLEEYWPVKPL---VARGEVERFTSIPGFE-KVRTLEN
|| *:*| |.|| *|||..| :|| |. .| |: | ||| ||
..TLPETVI-TAQTVVIGTPDQMANS-------ASTLWQAGAKLLKVKLDNHLISERMVA
TTEEE T EEE HHHHHHH HHHHHHH TTEEEEE TTTHHHHHHH
HEHEH EEEEE HEEE HHHHHHHHHH HH E HHHHHH
VLAIYNNPVMVVG-DAVIEESEGI--TDRFLVSPAEALEWYEKGAALEFDFTDLFIPQVR
:| |:. | *| | |: : :. : |.: ** | : | :: : ||
IRTAVPDATLIVDANESWRAEGLAARCQLLADLGVAMLEQPLPAQDDAALENFIHPLPIC
HHHHTTTTEEEEETTTT TTTHHHHHHHHHHH EEE TTTTTGGGG TTTTEE
HHHHHHHHHH HHEEEEEHH EE EH HHHEHHHEH HHHHHH
RWIEKLKAELRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVS
: : ||| | |. **|:. :.:* | | ** | *| . ||*
ADESCHTRSNLKALKGRYEMVNIKLDKTGGLTEALALAT--EARAQGFSLM-LGCMLCTS
ETTTT GGGHHHHTTTT EEEE GGG HHHHHHHHH HHHHH EEE E H
EE EEE EE HE HH H
NPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLT-PGTMLYLPRGLWHSTKSDQ
::|:: .| **. | : ::*: ...:| *|
RAISAALPLVPQVSFADLDGPTWLAVDVEPALQFTTGELHL...................
HHHHHHGGGGGGTTEE GGGGTTTTTTTT EEETTEEE
HEHHE HHHHHHHHHHHHHHHHHH HHHHHH H HHH H HH HHHHHHHH
ATLALNITFGQPAWLDLMLAALRKKLISDNRFRELAVNHQSLHESSKSELNGYLESLIQT
............................................................
H H HH EHH HHHHHHHHHHH
LSENAETLTPEQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
........................................
seq 2aak_ 460 340 0.00 -100000.00 150 10
s_m = 857 s_ss = 6 s_cc = 182 go = -500 ge = -160
H HHHHHHHH H H HHHH H H HHEHHHHHHHEHEH
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYN
............................................................
EEEEE HEEE HHHHHHHHHH HH E HHHHHHHHHHHHHHH
NPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLFIPQVRRWIEKLKAE
............................................................
H HHEEEEEHH EE EH HHHEHHHEH HHHHHH
LRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLS
: .. || | *.|| ||.. * . * |:
.........................MSTPARKRLM-RDFKRLQQDPPAGISGAPQDNNIM
HHHHHHH HHHHHHHH TTTEEEEEETTEEE
EE EE E EE HE HH HHEHH
EAPYYP-DDLQSYWKGDPPKEDLPDAEI-----VNLTPGTMLYLPRGLWHSTKSDQATLA
. .:..:|* . ::| | :|* *| || * .|* . .:: |
L-----WNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSR-MFHPNIYADGSIC
E EEEEEEETTTTTTTTEEEEEEEE TTTTTTTT EEEE TTTTTTTTTTT
E HH HHHHHHHHHHHHHHHH HHHHHH H HHH H HH HHHHHHHH
LNITFGQPAW----LDLMLAALRKKLISDNRFRELAVNHQSLHESSKSELNGYLESLIQT
*|* :*|| | |* ::.:*|| *: . . : :| :**.*|*. :|..||.
LDILQNQWS-PIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVEQ
TGGGTTTTT TTT HHHHHHHHHHHHH TTTTTTTHHHHHHHHH HHHHHHHHHHHHHH
H H HH EHH HHHHHHHHHHH
LSENAETLTPEQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
SWT.....................................
HH
seq 1pgjA 459 361 0.00 -100000.00 278 32
s_m = 1733 s_ss = -26 s_cc = -86 go = -900 ge = -360
H HHHHHHHH H H HHHH H H HHEHHHHHHHE
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSI----PGFEKVRTLENVL
| || | | | || || *
...................................GAGSCVKMYHNSGEYAILQIWGEVF
HHHHHHHHHHHHHHHHHHHHHHHHH
HEH EEEEE HEEE HHHHHHHHHH HH E HHHH
AIYNNPVMVVGD-----AVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLFIPQ--
:* . .:. | . . : | * : ||* . .* . .:|.| * :
DILRAMGLNNDEVAAVLEDWKSKNFLKSYMLDISIAAARAKDKDGSYLTEHVMDRIGSKG
HHHHHH HHHHHHHHHHHHHHTTTTTHHHHHHHHHHH EETTTEEGGGG TTT
HHHHHHHHHHHH HHEEEEEHH EE E H HHHEHHHEH HHHHHH
VRRWIEKLKAELRLPAGTSSKAIVYAAKNGGGFKAHF--DAYTNLIFQIQGEKTWKLAKN
: .*. | *:||** || *|*| :|. || : | .* : .:
TGLWSAQEALEIGVPAPSLNMAVVSRQFTM-------YKTERQANASNAPGITQSPGYTL
HHHHHHHHHHHH HHHHHHHHHHHHHH HHHHHHHHHHHTTTTTT T
EE EEE EE
ENVSNPMQHYDLSEAPYYPDDLQSYWKGDPP---KEDLPDAEIVNLTPGTMLY-------
.*:* . : :: . | .*. | | ..: : | *: |||.
KNKSPSGPEIKQLYDSVCIAIISCYAQM---FQCLREMDKVHNFGLNLPATI-ATFRAGC
TTTTTTTHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHH HHHHH HH TTT
HE HH HHEHHE HHHHHHHHHHH HHHHHHH HHHHHH H
LPRGL----WHSTKSDQATLALNITFGQPAWLDLMLAALR--KKLISDNRFRELAVNHQS
| .*| ||:| ::|| .: | *|. .|. |||: . ::*:. . | ::
ILQGYLLKPMTEAFEKNPNISNLMCAFQTEIRAGLQNYRDMVALITSKLEVSIPVLSASL
TTTT HHHHHHHHHHHTTTTTTGGGGGHHHHHHHHHHHHHHHHHHHHH HHHHHHH
HHH H HH HHHHHHHHH H HH EHH HHHHHHHHHHH
LHESSKSELNGYLESLIQTLSENAETLTPEQIFQSQD--SDFDPYQSTQLVFRQLLTSYK
::|| :. . :|*|| | :|| * .| .||| *
NYVTAMFTPTLKYGQLVSLQRDVFGRHGYERVDKDGRESFQWPELQ..............
HHHHHHHTTTTHHHHHHHHHHHHHH EETTTT EE
F
.
seq 1ej5A 458 335 0.00 -100000.00 114 12
s_m = 803 s_ss = 38 s_cc = 90 go = -400 ge = -150
H HHHHHHHH H H HHHH H H HHEHHHHHHHEHEH
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYN
............................................................
EEEEE HEEE HHHHHHHHHH HH E HHHHHHHHHHHHHHH
NPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLFIPQVRRWIEKLKAE
............................................................
H HHEEEEEHH EE EH HHHEHHHEH HHHHHH
LRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLS
............................................................
EE EE E EE HE HH HHEHHE
EAPYYPDDLQSYWKGDPPKEDLPDAEI-VNLTPG-TMLYLPRGLWHSTKSDQATLALNIT
.. :.:|| | : * || *:| * * : |
..................SGFKHVSHVGWDPQNGFDVNNLDPDL--------RSLFSRAG
TTT TTTTT TTTTT HHH HHHHHHH
HHHHHHHHHHHHHHHHHH HHHHHH H HHH H HH HHHHHHHHH H
FGQPAWLDLMLAALRKKLISDNRFRELAVNHQSLHESSKSELNGYLESLIQTLSENAETL
| . .* :| *: |*.*: *::::: :..| * : . *:*|. *:: |.
ISEAQLTDAETSKLIYDFIEDQGGLEAVRQE--MRRQGGSGGSQSSEGLVGALMHVMQKR
HHHHH HHHHHHHHHHHHHH HHHHHHH HHHHTTTTTT TTTHHHHHHHHHHTT
HH EHH HHHHHHHHHHH
TPEQIFQSQDSD---FDPYQSTQLVFRQLLTSYKF
: . ||:.:*
SRAIHSSDEGEDQAG....................
TTTTTT TTTT
seq 1eg9B 457 346 0.00 -100000.00 192 16
s_m = 858 s_ss = -68 s_cc = 142 go = -300 ge = -160
H HHHHHHHH H H HHHH H H HHEHHHHHHHEHEH
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYN
............................................................
EEEEE HEEE HHHHHHHHHH HH E HHHHHHHHHHHH
NPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLFIPQVRRWIEKL---
..| | .. .| . : ..| | || :* ... |* ||* |* | |
.MMINIQEDKLVSAHDAEEILRFFNCHDSALQQEATTLLTQEAHLLDIQAYRAWLEHCVG
U TTTTTTTT HHHHHHHHHHHH HHHHHHHHHHHHHHHHHHHH HHHHHHHHEE
HHHH HHEEEEEHH EE EH HHHE HHHEH HHHHHH
-KAELRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNL---IFQIQGEKTWKLAKNENVSNP
. .: || |.::.* *.|.. | .|||: * | ||: .:.* ||
SEVQYQVISRELRAASERRYKLNEAMNVYNENFQQLKVRVEHQLDPQNWGNSPKLRFTRF
EEEEEEEEEE TTTTTTT EEEEEEE HHHHHHHHHHHHTTTTGGGTTT EEEEE
EE EEE EE HE
MQHYDLSEAPYYPDDLQSYW---------KGDPPKEDLPDAEIVNLTPGTMLYLPRGLWH
| . ..: |. * . : :.| : . ::| :.*| . * :
ITNVQAAMDVNDKELLHIRSNVILHRARRGNQVDVFYAAREDKWKRGEGGVRKLVQRFVD
EEEEEEEETTTTTTEEEEEEEEEEEEEETTTEEEEEEEEEEEEEE TTTT EEEEEEEE
HH HHEHHE HHHHHHHHHHHHHHHHHH HHHHHH H HHH H HH HH
STKSDQATLALNITFGQPAWLDLMLAALRKKLISDNRFRELAVNHQSLHESSKSELNGYL
|. .* :*|| |
YPERILQTHNLMVFL.............................................
TTTTTTT TTT
HHHHHHH H HH EHH HHHHHHHHHHH
ESLIQTLSENAETLTPEQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
..............................................
seq 1jscA 456 349 0.00 -100000.00 187 15
s_m = 953 s_ss = 24 s_cc = 108 go = -400 ge = -270
H HHHHHHHH H H HHHH H H HHEHHHHHHHEHEH
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYN
............................................................
EEEEE HEEE HHHHHHHHHH HH E HHHH
NPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTD-----------LFIPQ
.|.. |..|* *.*| || *|:::
......................AQDEFVMQSINKAADLINLA--KKPVLYVGAGILNHAD
HHHHHHHHHHHHHHHHHHT TTEEEEE GGGGTTTH
HHHHHHHHHHHH HHEEEEEHH EE EH HHHEHHHEH HHHHHH
VRRWIEKLKAELRLPAGTSSKAIVYAAKNGGGFKAHFDAYTNLIFQIQGEKTWKLAKNEN
|.*:::|* ::|* *.. . * *: || *:| . .| .|* .* ** .
GPRLLKELSDRAQIP--------VTTTLQGLGSFDQEDPKSLDMLGMHGCATANLAVQNA
HHHHHHHHHHHH EEE GGGTTTTTTTTTTEEEE TTTT HHHHHHHHHT
EE EEE EE HE H
VSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTML--YLPRGLWHSTK
: . : :|| : : . . : *. . |. : |.*:|| |||: .|
DLIIAVGARFDDRVTGNISKFAPEARRAAAEGRGGIIHFEVSPKNI-NKVVQTQIAVEGD
TEEEEETT HHHHTTGGGTTHHHHHHHHH EEEEEE GGGT TTTT TTEEEE
H HHEHHE H HHHHHHHHHHHH HHHHH HHHHHH H HHH H HH
SDQATLALNITFGQPA----WLDLMLAALRKK--LISDNRFRELAVNHQSLHESSKSELN
| |. |. |.::: * | | :| :||
ATTNLGKMMSKIFPVKERSEWFAQINKWKKEYPY..........................
HHHHHHHHGGG HHHHHHHHHHHHTTT
HHHHHHHHH H HH EHH HHHHHHHHHHH
GYLESLIQTLSENAETLTPEQIFQSQDSDFDPYQSTQLVFRQLLTSYKF
.................................................
seq 1gpmA 454 364 0.00 -100000.00 175 19
s_m = 1130 s_ss = -7 s_cc = 140 go = -500 ge = -360
H HHHHHHHH H H HHHH H H HHEHHHHHHHEHEH
MSAVTESVLESIISPVTMSEFLEEYWPVKPLVARGEVERFTSIPGFEKVRTLENVLAIYN
............................................................
EEEEE HEEE HHHHHHHHHH HH E HHHHHHHHHHHHHHH
NPVMVVGDAVIEESEGITDRFLVSPAEALEWYEKGAALEFDFTDLFIPQVRRWIEKLKAE
* |*. * |** | |.. * *:::|*..
.............................ENIHKHRILILDFGSQYTQLVARRVRELGVY
TTTTTTEEEEETTT HHHHHHHHHHHH
H HHEEEEEHH EE EH HHHEHHHEH HHHHHH
LRLPAGTSSKAIVYAAKN-----GGGFKAHFDAYTNLIFQIQGEKTWKLAKNE-------
* *| || * | .. |** |. |. ||* * | |
CELWAWDVTEAQIRDFNPSGIILSGGPESTTEENSPRAPQYVFEAGVPVFGVCYGMQTMA
EEEEETTT HHHHHHH TTEEEE TTTTTTT GGGG EEEE HHHHHHH
EE EEE EE
-------NVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLPRG
.** : | . .|:.* . .... .. * :|| | :| |*||
MQLGGHVEASNEREFGYAQVEVVNDSALVRGIEDALTADGKPLLDVWMSHGDKVTAIPSD
HH EEE TTTTEEEEEEEEE TTTTTTT EETTTT EEEEEEEEE EEEE TTT
HE HH HHEHHE HHHHHHHHHHHHHHHHHH HHHHH
LWHSTKSDQATLALN--------ITFG-------QPAWLDLMLAALRKKLISDNRFRELA
| . |:| |* .||| | . .||. ||*| * : | :
FITVASTESCPFAI-MANEEKRFYGVQFHPEVTHTRQGMRMLERFVRD--ICQCEAL...
TEEEEETTTTTTTE EEETTTTEEEE TTTTTTTTTTHHHHHHHHHHH TTT T
H H HHH H HH HHHHHHHHH H HH EHH HHHHHHHHHHH
VNHQSLHESSKSELNGYLESLIQTLSENAETLTPEQIFQSQDSDFDPYQSTQLVFRQLLT
............................................................
SYKF
....