RID=1099497762-3615-45777742879.BLASTQ4,

BLASTP 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
RID: 1099497762-3615-45777742879.BLASTQ4
Query= (109 letters)
Database: PDB protein database 18,695 sequences; 4,163,319 total letters
If you have any problems or questions with the results of this search
please refer to the BLAST FAQs
Taxonomy reports
Distribution of 14 Blast Hits on the Query Sequence

Related Structures

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|27573727|pdb|1KU9|B  Chain B, X-Ray Structure Of A Methan...    39   3e-04 
gi|28373543|pdb|1LJ9|B  Chain B, The Crystal Structure Of Th...    31   0.056 
gi|15988504|pdb|1H6P|B  Chain B, Dimeristion Domain From Hum...    30   0.095 
gi|46015340|pdb|1Q7B|D  Chain D, The Structure Of Betaketoac...    25   2.3   
gi|46015342|pdb|1Q7C|B  Chain B, The Structure Of Betaketoac...    25   2.3   
gi|2392137|pdb|1AHR|   Calmodulin Mutant With A Two Residue ...    25   2.3   
gi|18655416|pdb|1I1G|B  Chain B, Crystal Structure Of The Lr...    25   4.0   
gi|4699707|pdb|1A6E|A  Chain A, Thermosome - Mg-Adp-Alf3 Com...    25   4.0   
gi|2781187|pdb|1ASX|   Apical Domain Of The Chaperonin From ...    25   4.0   
gi|49259125|pdb|1SQL|P  Chain P, Crystal Structure Of 7,8-Di...    24   6.8   
gi|52696194|pdb|1VLF|X  Chain X, Crystal Structure Of Pyroga...    24   6.8   
gi|42543274|pdb|1P9B|A  Chain A, Structure Of Fully Ligated ...    24   6.8   
gi|6137387|pdb|3BTA|A  Chain A, Crystal Structure Of Botulin...    24   6.8   
gi|231093|pdb|4TNC|   Troponin C                                   23   8.9   

Alignments


>gi|27573727|pdb|1KU9|B   Chain B, X-Ray Structure Of A Methanococcus Jannaschii Dna-Binding
           Protein: Implications For Antibiotic Resistance In
           Staphylococcus Aureus
 gi|27573726|pdb|1KU9|A   Chain A, X-Ray Structure Of A Methanococcus Jannaschii Dna-Binding
           Protein: Implications For Antibiotic Resistance In
           Staphylococcus Aureus
          Length = 152

 Score = 38.5 bits (88), Expect = 3e-04
 Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 7/69 (10%)

Query: 34  EKPITSEELADIFKLSKTTVENSLKKLIELGLVVRTKTEGKKIGRPKYYYSI----SSNI 89
           +KP+T  ++ +  K+SK  V  SLKKL ELG V +   +G+   R  YY ++    S   
Sbjct: 39  DKPLTISDIXEELKISKGNVSXSLKKLEELGFVRKVWIKGE---RKNYYEAVDGFSSIKD 95

Query: 90  LEKIRNDLL 98
           + K ++DL+
Sbjct: 96  IAKRKHDLI 104



>gi|28373543|pdb|1LJ9|B   Chain B, The Crystal Structure Of The Transcriptional Regulator
          Slya
 gi|28373542|pdb|1LJ9|A   Chain A, The Crystal Structure Of The Transcriptional Regulator
          Slya
          Length = 144

 Score = 30.8 bits (68), Expect = 0.056
 Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)

Query: 37 ITSEELADIFKLSKTTVENSLKKLIELGLVVRTK-TEGKKIGR 78
          I  E++A++ K+ +TT   ++K+L E G + R +    KKI R
Sbjct: 44 IIQEKIAELIKVDRTTAARAIKRLEEQGFIYRQEDASNKKIKR 86



>gi|15988504|pdb|1H6P|B   Chain B, Dimeristion Domain From Human Trf2
 gi|15988503|pdb|1H6P|A   Chain A, Dimeristion Domain From Human Trf2
          Length = 203

 Score = 30.0 bits (66), Expect = 0.095
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)

Query: 46  FKLSKTTVENSLKKLIELGLVVRTKT-EGKKIGRPKYYYSISSNILEKIRNDLLNCAKRM 104
           F L++  VE+S K + E  +++  K  E +K  +    +       +K+RNDLLN  +  
Sbjct: 101 FTLTEAVVESSRKLVKEAAVIICIKNKEFEKASKILKKHMSKDPTTQKLRNDLLNIIREK 160

Query: 105 ELA 107
            LA
Sbjct: 161 NLA 163



>gi|46015340|pdb|1Q7B|D   Chain D, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
           In Complex With Nadp+
 gi|46015339|pdb|1Q7B|C   Chain C, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
           In Complex With Nadp+
 gi|46015338|pdb|1Q7B|B   Chain B, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
           In Complex With Nadp+
 gi|46015337|pdb|1Q7B|A   Chain A, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
           In Complex With Nadp+
 gi|13096193|pdb|1I01|H   Chain H, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
           Reductase From E. Coli.
 gi|13096192|pdb|1I01|G   Chain G, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
           Reductase From E. Coli.
 gi|13096191|pdb|1I01|F   Chain F, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
           Reductase From E. Coli.
 gi|13096190|pdb|1I01|E   Chain E, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
           Reductase From E. Coli.
 gi|13096189|pdb|1I01|D   Chain D, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
           Reductase From E. Coli.
 gi|13096188|pdb|1I01|C   Chain C, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
           Reductase From E. Coli.
 gi|13096187|pdb|1I01|B   Chain B, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
           Reductase From E. Coli.
 gi|13096186|pdb|1I01|A   Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
           Reductase From E. Coli.
          Length = 244

 Score = 25.4 bits (54), Expect = 2.3
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 5/53 (9%)

Query: 26  VLLKMVEIE-KPITSEELADIFKLSKTTVENSLKK----LIELGLVVRTKTEG 73
           +L++M + E   I    L+ +F+LSK  +   +KK    +I +G VV T   G
Sbjct: 94  LLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNG 146



>gi|46015342|pdb|1Q7C|B   Chain B, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant
           In Complex With Nadph Fragment
 gi|46015341|pdb|1Q7C|A   Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant
           In Complex With Nadph Fragment
          Length = 244

 Score = 25.4 bits (54), Expect = 2.3
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 5/53 (9%)

Query: 26  VLLKMVEIE-KPITSEELADIFKLSKTTVENSLKK----LIELGLVVRTKTEG 73
           +L++M + E   I    L+ +F+LSK  +   +KK    +I +G VV T   G
Sbjct: 94  LLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNG 146



>gi|2392137|pdb|1AHR|    Calmodulin Mutant With A Two Residue Deletion In The Central Helix
          Length = 146

 Score = 25.4 bits (54), Expect = 2.3
 Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 2/46 (4%)

Query: 1   MMKEKLESKKDEIRCCYKITDTDVAVLLKMVEIEKPITS--EELAD 44
           MM  K++  ++EIR  +++ D D    +   E+   +T+  E+L D
Sbjct: 71  MMARKMKDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTD 116



>gi|18655416|pdb|1I1G|B   Chain B, Crystal Structure Of The Lrp-Like Transcriptional
          Regulator From The Archaeon Pyrococcus Furiosus
 gi|18655415|pdb|1I1G|A   Chain A, Crystal Structure Of The Lrp-Like Transcriptional
          Regulator From The Archaeon Pyrococcus Furiosus
          Length = 141

 Score = 24.6 bits (52), Expect = 4.0
 Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 2/54 (3%)

Query: 26 VLLKMVEIEKPITSEELADIFKLSKTTVENSLKKLIELGLV--VRTKTEGKKIG 77
          ++L+++E +      E+A    +S+T V   +K L E G++     K   KK+G
Sbjct: 8  IILEILEKDARTPFTEIAKKLGISETAVRKRVKALEEKGIIEGYTIKINPKKLG 61



>gi|4699707|pdb|1A6E|A   Chain A, Thermosome - Mg-Adp-Alf3 Complex
 gi|4699705|pdb|1A6D|A   Chain A, Thermosome From T. Acidophilum
          Length = 545

 Score = 24.6 bits (52), Expect = 4.0
 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 5/62 (8%)

Query: 3   KEKLESKKDEIRCCYKITDTDVAVLLKMVEIEKPITSEELADIFKLSK--TTVENSLKKL 60
           KEK+ SK  ++    KI   D A+ +K  EIE  +   +++D  K+        N+ K++
Sbjct: 220 KEKVHSKMPDVVKNAKIALIDSALEIKKTEIEAKV---QISDPSKIQDFLNQETNTFKQM 276

Query: 61  IE 62
           +E
Sbjct: 277 VE 278



>gi|2781187|pdb|1ASX|    Apical Domain Of The Chaperonin From Thermoplasma Acidophilum
 gi|2781186|pdb|1ASS|    Apical Domain Of The Chaperonin From Thermoplasma Acidophilum
          Length = 159

 Score = 24.6 bits (52), Expect = 4.0
 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 5/62 (8%)

Query: 3  KEKLESKKDEIRCCYKITDTDVAVLLKMVEIEKPITSEELADIFKLSK--TTVENSLKKL 60
          KEK+ SK  ++    KI   D A+ +K  EIE  +   +++D  K+        N+ K++
Sbjct: 8  KEKVHSKMPDVVKNAKIALIDSALEIKKTEIEAKV---QISDPSKIQDFLNQETNTFKQM 64

Query: 61 IE 62
          +E
Sbjct: 65 VE 66



>gi|49259125|pdb|1SQL|P   Chain P, Crystal Structure Of 7,8-Dihydroneopterin Aldolase In
          Complex With Guanine
 gi|49259124|pdb|1SQL|O   Chain O, Crystal Structure Of 7,8-Dihydroneopterin Aldolase In
          Complex With Guanine
 gi|49259123|pdb|1SQL|N   Chain N, Crystal Structure Of 7,8-Dihydroneopterin Aldolase In
          Complex With Guanine
 gi|49259122|pdb|1SQL|M   Chain M, Crystal Structure Of 7,8-Dihydroneopterin Aldolase In
          Complex With Guanine
 gi|49259121|pdb|1SQL|L   Chain L, Crystal Structure Of 7,8-Dihydroneopterin Aldolase In
          Complex With Guanine
 gi|49259120|pdb|1SQL|K   Chain K, Crystal Structure Of 7,8-Dihydroneopterin Aldolase In
          Complex With Guanine
 gi|49259119|pdb|1SQL|J   Chain J, Crystal Structure Of 7,8-Dihydroneopterin Aldolase In
          Complex With Guanine
 gi|49259118|pdb|1SQL|I   Chain I, Crystal Structure Of 7,8-Dihydroneopterin Aldolase In
          Complex With Guanine
 gi|49259117|pdb|1SQL|H   Chain H, Crystal Structure Of 7,8-Dihydroneopterin Aldolase In
          Complex With Guanine
 gi|49259116|pdb|1SQL|G   Chain G, Crystal Structure Of 7,8-Dihydroneopterin Aldolase In
          Complex With Guanine
 gi|49259115|pdb|1SQL|F   Chain F, Crystal Structure Of 7,8-Dihydroneopterin Aldolase In
          Complex With Guanine
 gi|49259114|pdb|1SQL|E   Chain E, Crystal Structure Of 7,8-Dihydroneopterin Aldolase In
          Complex With Guanine
 gi|49259113|pdb|1SQL|D   Chain D, Crystal Structure Of 7,8-Dihydroneopterin Aldolase In
          Complex With Guanine
 gi|49259112|pdb|1SQL|C   Chain C, Crystal Structure Of 7,8-Dihydroneopterin Aldolase In
          Complex With Guanine
 gi|49259111|pdb|1SQL|B   Chain B, Crystal Structure Of 7,8-Dihydroneopterin Aldolase In
          Complex With Guanine
 gi|49259110|pdb|1SQL|A   Chain A, Crystal Structure Of 7,8-Dihydroneopterin Aldolase In
          Complex With Guanine
          Length = 146

 Score = 23.9 bits (50), Expect = 6.8
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)

Query: 19 ITDTDVAVLLKMV-EIEKPITSEELADIFKLSKTTVENSLKKLIE 62
          + D D  V LK   E +    +    DIF L+K  VE S + L+E
Sbjct: 49 LVDIDAWVSLKKAGESDNLEDTISYVDIFSLAKEIVEGSPRNLLE 93



>gi|52696194|pdb|1VLF|X   Chain X, Crystal Structure Of Pyrogallol-Phloroglucinol
           Transhydroxylase From Pelobacter Acidigallici Complexed
           With Inhibitor 1,2,4,5-Tetrahydroxy-Benzene
 gi|52696192|pdb|1VLF|V   Chain V, Crystal Structure Of Pyrogallol-Phloroglucinol
           Transhydroxylase From Pelobacter Acidigallici Complexed
           With Inhibitor 1,2,4,5-Tetrahydroxy-Benzene
 gi|52696190|pdb|1VLF|T   Chain T, Crystal Structure Of Pyrogallol-Phloroglucinol
           Transhydroxylase From Pelobacter Acidigallici Complexed
           With Inhibitor 1,2,4,5-Tetrahydroxy-Benzene
 gi|52696188|pdb|1VLF|R   Chain R, Crystal Structure Of Pyrogallol-Phloroglucinol
           Transhydroxylase From Pelobacter Acidigallici Complexed
           With Inhibitor 1,2,4,5-Tetrahydroxy-Benzene
 gi|52696186|pdb|1VLF|P   Chain P, Crystal Structure Of Pyrogallol-Phloroglucinol
           Transhydroxylase From Pelobacter Acidigallici Complexed
           With Inhibitor 1,2,4,5-Tetrahydroxy-Benzene
 gi|52696184|pdb|1VLF|N   Chain N, Crystal Structure Of Pyrogallol-Phloroglucinol
           Transhydroxylase From Pelobacter Acidigallici Complexed
           With Inhibitor 1,2,4,5-Tetrahydroxy-Benzene
 gi|52696182|pdb|1VLE|X   Chain X, Crystal Structure Of Pyrogallol-Phloroglucinol
           Transhydroxylase From Pelobacter Acidigallici Complexed
           With Pyrogallol
 gi|52696180|pdb|1VLE|V   Chain V, Crystal Structure Of Pyrogallol-Phloroglucinol
           Transhydroxylase From Pelobacter Acidigallici Complexed
           With Pyrogallol
 gi|52696178|pdb|1VLE|T   Chain T, Crystal Structure Of Pyrogallol-Phloroglucinol
           Transhydroxylase From Pelobacter Acidigallici Complexed
           With Pyrogallol
 gi|52696176|pdb|1VLE|R   Chain R, Crystal Structure Of Pyrogallol-Phloroglucinol
           Transhydroxylase From Pelobacter Acidigallici Complexed
           With Pyrogallol
 gi|52696174|pdb|1VLE|P   Chain P, Crystal Structure Of Pyrogallol-Phloroglucinol
           Transhydroxylase From Pelobacter Acidigallici Complexed
           With Pyrogallol
 gi|52696172|pdb|1VLE|N   Chain N, Crystal Structure Of Pyrogallol-Phloroglucinol
           Transhydroxylase From Pelobacter Acidigallici Complexed
           With Pyrogallol
 gi|52696170|pdb|1VLD|X   Chain X, Crystal Structure Of Pyrogallol-Phloroglucinol
           Transhydroxylase From Pelobacter Acidigallici
 gi|52696168|pdb|1VLD|V   Chain V, Crystal Structure Of Pyrogallol-Phloroglucinol
           Transhydroxylase From Pelobacter Acidigallici
 gi|52696166|pdb|1VLD|T   Chain T, Crystal Structure Of Pyrogallol-Phloroglucinol
           Transhydroxylase From Pelobacter Acidigallici
 gi|52696164|pdb|1VLD|R   Chain R, Crystal Structure Of Pyrogallol-Phloroglucinol
           Transhydroxylase From Pelobacter Acidigallici
 gi|52696162|pdb|1VLD|P   Chain P, Crystal Structure Of Pyrogallol-Phloroglucinol
           Transhydroxylase From Pelobacter Acidigallici
 gi|52696160|pdb|1VLD|N   Chain N, Crystal Structure Of Pyrogallol-Phloroglucinol
           Transhydroxylase From Pelobacter Acidigallici
 gi|52695788|pdb|1TI6|L   Chain L, Crystal Structure Of Pyrogallol-Phloroglucinol
           Transhydroxylase From Pelobacter Acidigallici Complexed
           With Inhibitor 1,2,4,5-Tetrahydroxy-Benzene
 gi|52695786|pdb|1TI6|J   Chain J, Crystal Structure Of Pyrogallol-Phloroglucinol
           Transhydroxylase From Pelobacter Acidigallici Complexed
           With Inhibitor 1,2,4,5-Tetrahydroxy-Benzene
 gi|52695784|pdb|1TI6|H   Chain H, Crystal Structure Of Pyrogallol-Phloroglucinol
           Transhydroxylase From Pelobacter Acidigallici Complexed
           With Inhibitor 1,2,4,5-Tetrahydroxy-Benzene
 gi|52695782|pdb|1TI6|F   Chain F, Crystal Structure Of Pyrogallol-Phloroglucinol
           Transhydroxylase From Pelobacter Acidigallici Complexed
           With Inhibitor 1,2,4,5-Tetrahydroxy-Benzene
 gi|52695780|pdb|1TI6|D   Chain D, Crystal Structure Of Pyrogallol-Phloroglucinol
           Transhydroxylase From Pelobacter Acidigallici Complexed
           With Inhibitor 1,2,4,5-Tetrahydroxy-Benzene
 gi|52695778|pdb|1TI6|B   Chain B, Crystal Structure Of Pyrogallol-Phloroglucinol
           Transhydroxylase From Pelobacter Acidigallici Complexed
           With Inhibitor 1,2,4,5-Tetrahydroxy-Benzene
 gi|52695776|pdb|1TI4|L   Chain L, Crystal Structure Of Pyrogallol-Phloroglucinol
           Transhydroxylase From Pelobacter Acidigallici Complexed
           With Pyrogallol
 gi|52695774|pdb|1TI4|J   Chain J, Crystal Structure Of Pyrogallol-Phloroglucinol
           Transhydroxylase From Pelobacter Acidigallici Complexed
           With Pyrogallol
 gi|52695772|pdb|1TI4|H   Chain H, Crystal Structure Of Pyrogallol-Phloroglucinol
           Transhydroxylase From Pelobacter Acidigallici Complexed
           With Pyrogallol
 gi|52695770|pdb|1TI4|F   Chain F, Crystal Structure Of Pyrogallol-Phloroglucinol
           Transhydroxylase From Pelobacter Acidigallici Complexed
           With Pyrogallol
 gi|52695768|pdb|1TI4|D   Chain D, Crystal Structure Of Pyrogallol-Phloroglucinol
           Transhydroxylase From Pelobacter Acidigallici Complexed
           With Pyrogallol
 gi|52695766|pdb|1TI4|B   Chain B, Crystal Structure Of Pyrogallol-Phloroglucinol
           Transhydroxylase From Pelobacter Acidigallici Complexed
           With Pyrogallol
 gi|52695764|pdb|1TI2|L   Chain L, Crystal Structure Of Pyrogallol-Phloroglucinol
           Transhydroxylase From Pelobacter Acidigallici
 gi|52695762|pdb|1TI2|J   Chain J, Crystal Structure Of Pyrogallol-Phloroglucinol
           Transhydroxylase From Pelobacter Acidigallici
 gi|52695760|pdb|1TI2|H   Chain H, Crystal Structure Of Pyrogallol-Phloroglucinol
           Transhydroxylase From Pelobacter Acidigallici
 gi|52695758|pdb|1TI2|F   Chain F, Crystal Structure Of Pyrogallol-Phloroglucinol
           Transhydroxylase From Pelobacter Acidigallici
 gi|52695756|pdb|1TI2|D   Chain D, Crystal Structure Of Pyrogallol-Phloroglucinol
           Transhydroxylase From Pelobacter Acidigallici
 gi|52695754|pdb|1TI2|B   Chain B, Crystal Structure Of Pyrogallol-Phloroglucinol
           Transhydroxylase From Pelobacter Acidigallici
          Length = 274

 Score = 23.9 bits (50), Expect = 6.8
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 3/39 (7%)

Query: 45  IFKLSKTTVENSLKKLIELGLVVRTKTEGKKIGRPKYYY 83
           +++  KTT E   KK+ E GL V     G K   P+ YY
Sbjct: 153 VYEFLKTTPEAMAKKVEEEGLEVIKPELGTK---PRVYY 188



>gi|42543274|pdb|1P9B|A   Chain A, Structure Of Fully Ligated Adenylosuccinate Synthetase
           From Plasmodium Falciparum
          Length = 442

 Score = 23.9 bits (50), Expect = 6.8
 Identities = 14/52 (26%), Positives = 22/52 (42%)

Query: 11  DEIRCCYKITDTDVAVLLKMVEIEKPITSEELADIFKLSKTTVENSLKKLIE 62
           D +   Y IT+ D    L +         + + D+     T +EN+ K LIE
Sbjct: 178 DHLMDLYNITEYDKEKELNLFYNYHIKLRDRIVDVISFMNTNLENNKKVLIE 229



>gi|6137387|pdb|3BTA|A   Chain A, Crystal Structure Of Botulinum Neurotoxin Serotype A
          Length = 1295

 Score = 23.9 bits (50), Expect = 6.8
 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 36  PITSEELADIFKLSKTTVENSLKKLIELGLVVRTKTEGKKIGRPKYYYSISSN 88
           PI   ++  +F L  + +E  LK  I    +    +    I  PKY+ SIS N
Sbjct: 907 PIDKNQI-QLFNLESSKIEVILKNAIVYNSMYENFSTSFWIRIPKYFNSISLN 958



>gi|231093|pdb|4TNC|    Troponin C
          Length = 162

 Score = 23.5 bits (49), Expect = 8.9
 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 24  VAVLLKMVEIEKPITSEELADIFKLSKTTVENSLKKLIELGLVVRTKTE 72
           V ++ +M E  K  + EELAD F++     +  +  + ELG ++R   E
Sbjct: 80  VMMVRQMKEDAKGKSEEELADCFRIFDKNADGFI-DIEELGEILRATGE 127






  Database: PDB protein database
    Posted date:  Nov 3, 2004 12:50 AM
  Number of letters in database: 4,163,319
  Number of sequences in database:  18,695
  
Lambda     K      H
   0.315    0.132    0.350 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 365,986
Number of Sequences: 18695
Number of extensions: 11934
Number of successful extensions: 30
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 29
Number of HSP's gapped (non-prelim): 5
length of query: 109
length of database: 4,163,319
effective HSP length: 72
effective length of query: 37
effective length of database: 2,817,279
effective search space: 104239323
effective search space used: 104239323
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 49 (23.5 bits)