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S | imple
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M | odular
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A | rchitecture
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R | esearch
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T | ool
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Domains within the query sequence T0163 of 369 residues
Mouse over domain / undefined region to see the
limits; click on it to go to further annotation; right-click to save
whole protein as PNG image
Transmembrane segments as predicted by the TMHMM2 program (
), coiled coil regions determined by the Coils2 program (
) and
Segments of low compositional complexity, determined by the SEG program (
)
Architecture analysis
Display all proteins with similar domain organisation.
Display all proteins with similar domain composition.
The
SMART diagram above represents a summary of the results shown below.
Domains with scores less significant than established cutoffs are not
shown in the diagram. Features are also not shown when two or more
occupy the same piece of sequence; the priority for display is given by
SMART > PFAM > PROSPERO repeats > Signal peptide >
Transmembrane > Coiled coil > Low complexity. In either case,
features not shown in the above diagram are marked 'hidden'
Confidently predicted domains, repeats, motifs and features:
These
features and domains are not shown in the diagram, either because their
scores are less significant than the required threshold, or because
they overlap with some other source of annotation:| name | begin | end | E-value | reason |
|---|
| low complexity | 7 | 20 | - | overlap |
| HELICc2 | 17 | 149 | 1.98e+03 | threshold |
| PolyA | 66 | 129 | 5.76e+02 | threshold |
| IGc2 | 101 | 161 | 4.51e+02 | threshold |
| KAZAL | 153 | 183 | 1.61e+03 | threshold |
