Protein families database of alignments and HMMs

  Results for T0163  

Trusted matches - domains scoring higher than the gathering threshold

DomainStartEndBitsEvalueAlignment Mode
DAO535131.304.6e-09Align ls




DAO 5-351 : FAD dependent oxidoreductase [369 residues]


DAO 5-351

Potential matches - Domains with Evalues above the cutoff

DomainStartEndBitsEvalueAlignment Mode
3HCDH_N2212.800.82Align fs
DAO55022.303.3e-06Align fs
GIDA6343.000.63Align fs
NAD_Gly3P_dh6256.800.044Align fs
TrkA-N6325.100.63Align fs
pyr_redox64015.309.4e-05Align fs


Alignments of Pfam-A domains to HMMs

Format for fetching alignments to seed

Alignment of DAO vs T0163/5-351

                   *->mdvvVIGgGViGlgtAldlalrGqgtlkvalvevrdladgtSsrsts
                      ++ vVIGgG+iG+ +A  la+     +++al+e   + ++t+s+ ++
       T0163     5    YEAVVIGGGIIGSAIAYYLAKEN---KNTALFESGTMGGRTTSAAAG 48   

                   lvhGGlrylelgdeeefklareslrereiLletlaphlvtpvrmllpllp
                   ++ + +   e++   +f++a  s r ++ L e+l   +   +r+  +   
       T0163    49 MLGAHAECEERD--AFFDFAMHSQRLYKGLGEELYALSGVDIRQHNGGMF 96   

                   slgdrlayeeaqlageflydflagfverklpssedLslseplelfPalkr
                        +++e   l+++++ d+ + +  +  ++     l+    + P+ ++
       T0163    97 --KLAFSEEDV-LQLRQMDDLDSVS--WYSKEEV---LE----KEPYASG 134  

                   dgLkGGleyvdGlvvddarlvetnaylaalagalmktgvevknLlkekrk
                   d        + + ++ d ++ve    + a  +a+  +g+e+ +      +
       T0163   135 D-------IFGASFIQDDVHVEPYFVCKAYVKAAKMLGAEIFE----HTP 173  

                   vtgkVeaeDleegaef......svgsradvvVNATGlwadelagdd.lks
                   v +       +  a+f ++++++v   a++vV A+G+w++ ++   +l++
       T0163   174 VLH----VERDGEALFiktpsgDV--WANHVVVASGVWSGMFFKQLgLNN 217  

                   aikirrigePirGqhlvVdapwkkhfiysldpetedgrvvyiiPreggkv
                   a+       P++G  l V +  ++ +  ++       ++ yi+Pr  g+ 
       T0163   218 AFL------PVKGECLSVWNDDIPLTKTLY------HDHCYIVPRKSGRL 255  

                   iiGtTdqpgnwdledpspteediqdILkrvnellsapqlkradvlreyaG
                   ++G+T  pg+w+ e+p+     +  ++k   ++l  p +   +v r +aG
       T0163   256 VVGATMKPGDWS-ETPDL--GGLESVMKKAKTML--PAIQNMKVDRFWAG 300  

                   lRPlrpdeRlekdrksesagtrgevllvHnyghgsnGliliwGgaltayr
                   lRP+++d+      k    + ++ +++ ++ gh +nG++l + +      
       T0163   301 LRPGTKDG------KPYIGRHPEDSRILFAAGHFRNGILLAPATGALISD 344  

                   lvaedlv<-*
                   l+  + v   
       T0163   345 LIMNKEV    351

Alignment of GIDA vs T0163/6-34

                   *->dViVIGGGHAGtEAAlaaArmGakVlLlE<-*
                        +VIGGG  G++ A+ +A+ + ++ L+E   
       T0163     6    EAVVIGGGIIGSAIAYYLAKENKNTALFE    34

Alignment of NAD_Gly3P_dh vs T0163/6-25

                   *->kvtVlGaGaWGTAlAkvLae<-*
                      + +V+G+G  G+A+A+ La+   
       T0163     6    EAVVIGGGIIGSAIAYYLAK    25

Alignment of TrkA-N vs T0163/6-32

                   *->hfiviGlGrvGrsvakeLleeGhdVvv<-*
                        +viG G  G+++a  L +e+ + ++   
       T0163     6    EAVVIGGGIIGSAIAYYLAKENKNTAL    32

Alignment of pyr_redox vs T0163/6-40

                   *->dvvIIGgGpAGlaAAiraaragflGrkrlkvalvEkeppltkgtlGG
                        v+IGgG  G a A ++a+   ++     +al+E +      t+GG
       T0163     6    EAVVIGGGIIGSAIAYYLAK---EN---KNTALFESG------TMGG 40   

                   <-*
                      
       T0163     -     -

 
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