3D-PSSM Fold Library (Link)

H-alpha helix

e = beta sheat

C = coil

C C C C

H H H

C C C C

E E E E E E E E

C C

E E E E E E E E E E

C C

E E E E E E E E E E E E

C C

E E E E E

C C C C C

H H H H H H H H H H H H H

C C C C C

E E E E E

C C C C C

H H H H

C C

H H H H H H H

C C

E E E E

C

H H H H H H H H H H

C C C C C C

E E

C C C C C C C C

E E E E E

C C

E E E E E

C C C C C C C C C C

E E E E

C C C C

E E E E E

H H

C C C C C C C C C C C C C C C C

H H H H H H H H H H H H H H H

C C C C

E E E E

C C C C C C C

H H H H H H H H H H H H H H H

C

Insgesamt 230

H', a helix element;

'E', a beta strand element

'-', a turn element

L == loop

C = coil

Secondary structure prediction (H = helix, E = strand, - = no prediction):

Fasta	Dsc?	3D-PSSM Fold Library	PSIPred (Link)	nnPredict
LLLLLL HHHHHHHHH LLL EEEE LLLL EEEEE LLLL HHHHHHHHHHHHHHH LLLLL EEEEEEE LLLLL EEEEEEEEEE LLL EEEEE L HHHHHHHHHHHHHHHH LLL EEEE LLLL H EEEEE LL HHHHHHHHHHH LLLLLLLLLLLLLLL EEEE LLLLLLLL EEEEE L HHHHHHHHHHHHH LLLLLL HHHHHHHHHHH LLLLLLLLLLLLLL HHHHHHHHH LL EE LLLLLLLL HHHHHHHHHH LL HHHH EEEEEE LLLLLLLLLLL EEE LLLLLLLL EEEEEEEEE LLLLL EEEEEEE HHHH LLLL EEEE LLLLL EEEEE LLLLLLLL Insgesamt 325	C(18) ****************** E(4) **** C(3) *** E(7) ******* C(3) *** H(16) **************** C(4) **** E(7) ******* C(5) ***** E(9) ********* C(4) **** E(6) ****** C(3) *** H(12) ************ C(3) *** E(6) ****** C(3) *** E(6) ****** C(3) *** H(7) ******* C(1) * H(4) **** C(5) ***** E(5) ***** C(3) *** E(7) ******* C(4) **** E(5) ***** C(2) ** H(6) ****** C(1) * H(3) *** C(11) *********** H(8) ******** C(16) **************** H(7) ******* C(3) *** E(4) **** C(6) ****** H(9) ********* C(5) ***** E(7) ******* C(11) *********** E(5) ***** C(9) ********* E(8) ******** C(3) *** E(7) ******* C(8) ******** E(6) ****** C(4) **** E(5) ***** C(8) ********	C C C C H H H C C C C E E E E E E E E C C E E E E E E E E E E C C E E E E E E E E E E E E C C E E E E E C C C C C H H H H H H H H H H H H H C C C C C E E E E E C C C C C H H H H C C H H H H H H H C C E E E E C H H H H H H H H H H C C C C C C E E C C C C C C C C E E E E E C C E E E E E C C C C C C C C C C E E E E C C C C E E E E E H H C C C C C C C C C C C C C C C C H H H H H H H H H H H H H H H C C C C E E E E C C C C C C C H H H H H H H H H H H H H H H C Insgesamt 230	CCCCCCCCCC HHHH CCCC EEEE CCCC EEEEEE C HHHHHHHHHH C HHH CCCCCCCC EEEEEEE CCCCC EEEEEEEEE CCC EEEEEE CC HHHHHHHHHHHHH CCCCCC EEEE CCC EEEEEEE CCC HHHHHHHHHH CCCCCCC EEEE CCC EEEEE CCCCCC EEEEEE C HHHHHHHHHHHHH CCCCCCC HHHHHHHHHH CCCCCCCCCCCCCC HHHH CC HHH CCCCCCCCCC HHHHHHHHHHH CCCCC EEEEEEEE CCCCCCCCCC EEEEE CCCCCC EEEEEEEEEE CCCCC EEEEEEE CCCCCCCC EEEE CCCCC EEEEE CCCCCCCC Insgesamt 325	---------------- HH E HH - H - HHHHH EE ------ HH -------- H - HHHHHHHHHHHHHH ----- HHHHH E ------- EE HHH ------- HHHHHHHHH - EE ------- HHH EEE HHHHHHHHHHHHHH ------- HHH E HH - HHHHHHHH ---- HH EEE --- H - HHHHHH ----- H - HH -- HHHHHHHH ----- EE --------------- HH ---- E -------- HHHHHHHHHH --- HHHHHHHH ---------- HHHHHHH ----- H -- HHHHHHH ----- EEEEEE ------ ---- EEE ------------------ insgesamt 325

Fasta

LLLLLL

HHHHHHHHH

LLL

EEEE

LLLL

EEEEE

LLLL

HHHHHHHHHHHHHHH

LLLLL

EEEEEEE

LLLLL

EEEEEEEEEE

LLL

EEEEE

L

HHHHHHHHHHHHHHHH

LLL

EEEE

LLLL

H

EEEEE

LL

HHHHHHHHHHH

LLLLLLLLLLLLLLL

EEEE

LLLLLLLL

EEEEE

L

HHHHHHHHHHHHH

LLLLLL

HHHHHHHHHHH

LLLLLLLLLLLLLL

HHHHHHHHH

LL

EE

LLLLLLLL

HHHHHHHHHH

LL

HHHH

EEEEEE

LLLLLLLLLLL

EEE

LLLLLLLL

EEEEEEEEE

LLLLL

EEEEEEE

HHHH

LLLL

EEEE

LLLLL

EEEEE

LLLLLLLL

Insgesamt 325

Dsc?

C(18) ******************

E(4) ****

C(3) ***

E(7) *******

C(3) ***

H(16) ****************

C(4) ****

E(7) *******

C(5) *****

E(9) *********

C(4) ****

E(6) ******

C(3) ***

H(12) ************

C(3) ***

E(6) ******

C(3) ***

E(6) ******

C(3) ***

H(7) *******

C(1) *

H(4) ****

C(5) *****

E(5) *****

C(3) ***

E(7) *******

C(4) ****

E(5) *****

C(2) **

H(6) ******

C(1) *

H(3) ***

C(11) ***********

H(8) ********

C(16) ****************

H(7) *******

C(3) ***

E(4) ****

C(6) ******

H(9) *********

C(5) *****

E(7) *******

C(11) ***********

E(5) *****

C(9) *********

E(8) ********

C(3) ***

E(7) *******

C(8) ********

E(6) ******

C(4) ****

E(5) *****

C(8) ********

nnPredict

H', a helix element;

'E', a beta strand element

'-', a turn element

Secondary structure prediction (H = helix, E = strand, - = no prediction):

----------------

HH

E

HH

-

H

-

HHHHH

EE

------

HH

--------

H

-

HHHHHHHHHHHHHH

-----

HHHHH

E

-------

EE

HHH

-------

HHHHHHHHH

-

EE

-------

HHH

EEE

HHHHHHHHHHHHHH

-------

HHH

E

HH

-

HHHHHHHH

----

HH

EEE

---

H

-

HHHHHH

-----

H

-

HH

--

HHHHHHHH

-----

EE

---------------

HH

----

E

--------

HHHHHHHHHH

---

HHHHHHHH

----------

HHHHHHH

-----

H

--

HHHHHHH

-----

EEEEEE

------

----

EEE

------------------

insgesamt 325

PSIPred (Link)

CCCCCCCCCC

HHHH

CCCC

EEEE

CCCC

EEEEEE

C

HHHHHHHHHH

C

HHH

CCCCCCCC

EEEEEEE

CCCCC

EEEEEEEEE

CCC

EEEEEE

CC

HHHHHHHHHHHHH

CCCCCC

EEEE

CCC

EEEEEEE

CCC

HHHHHHHHHH

CCCCCCC

EEEE

CCC

EEEEE

CCCCCC

EEEEEE

C

HHHHHHHHHHHHH

CCCCCCC

HHHHHHHHHH

CCCCCCCCCCCCCC

HHHH

CC

HHH

CCCCCCCCCC

HHHHHHHHHHH

CCCCC

EEEEEEEE

CCCCCCCCCC

EEEEE

CCCCCC

EEEEEEEEEE

CCCCC

EEEEEEE

CCCCCCCC

EEEE

CCCCC

EEEEE

CCCCCCCC

Insgesamt 325