Query PSSM

View Alignment	Fold Library	Template Length	Model	PSSM E_value	SAWTED E-value	Biotext	Class	Fold	SuperFamily	Family	Protein	Species	ID	Region	CS	PSSM Type
	c1b9ka_ 16%i.d.	237		0.173	1	1.00	not in SCOP 1.53	PDB header: endocytosis/exocytosis.	Chain: A: PDB Molecule:alpha-adaptin appendage domain;.	.	PDBTitle: alpha-adaptin appendage domain, from clathrin adaptor ap2 .	-	1b9k	a	0.000	1D
	d1pdkb_ 17%i.d.	149		1.91	0.759	0.74	All beta proteins	Common fold of diphtheria toxin/transcription factors/cytochrome f	Bacterial adhesins	Pilus subunits	PapK pilus subunit	Escherichia coli	1pdk	b:	0.901	R1D
	c1e42a_ 13%i.d.	233		1.96	1	n/a	not in SCOP 1.53	PDB header: endocytosis.	Chain: A: PDB Molecule:beta2-adaptin;.	.	PDBTitle: beta2-adaptin appendage domain, from clathrin adaptor ap2 .	-	1e42	a	0.000	1D
	d1i16__ 15%i.d.	130		2.77	1	1.00	All beta proteins	PDZ domain-like	PDZ domain-like	Interleukin 16	Interleukin 16	Human (Homo sapiens)	1i16	-	1.000	R1D
	d1avwb_ 15%i.d.	171		3.53	0.946	0.85	All beta proteins	beta-Trefoil	STI-like	Kunitz (STI) inhibitors	Soybean trypsin inhibitor	Soybean (Glycine max)	1avw	b:	0.652	1D
	d1wioa2 18%i.d.	113		3.61	0.857	0.76	All beta proteins	Immunoglobulin-like beta-sandwich	Immunoglobulin	V set domains (antibody variable domain-like)	CD4	Human (Homo sapiens)	1wio	a:179-291	0.423	3D
	d1wba__ 18%i.d.	171		3.62	1	0.85	All beta proteins	beta-Trefoil	STI-like	Kunitz (STI) inhibitors	Winged bean albumin 1	Goa bean (Psophocarpus tetragonolobus)	1wba	-	0.590	R1D
	d1obwa_ 21%i.d.	175		4.34	0.863	1.00	All beta proteins	OB-fold	Inorganic pyrophosphatase	Inorganic pyrophosphatase	Inorganic pyrophosphatase	Escherichia coli	1obw	a:	0.710	R1D
	d1kacb_ 10%i.d.	124		4.9	0.635	0.70	All beta proteins	Immunoglobulin-like beta-sandwich	Immunoglobulin	V set domains (antibody variable domain-like)	Coxsackie virus and adenovirus receptor (Car), domain 1	Human (Homo sapiens)	1kac	b:	0.400	3D
	d1a3wa1 20%i.d.	99		5.45	1	1.00	All beta proteins	Pyruvate kinase beta-barrel domain	Pyruvate kinase beta-barrel domain	Pyruvate kinase beta-barrel domain	Pyruvate kinase	Baker's yeast (Saccharomyces cerevisiae)	1a3w	a:88-188	0.915	R1D
	d6prch1 18%i.d.	222		5.7	0.961	0.83	All beta proteins	Photosynthetic reaction centre, H-chain, cytoplasmic domain	Photosynthetic reaction centre, H-chain, cytoplasmic domain	Photosynthetic reaction centre, H-chain, cytoplasmic domain	Photosynthetic reaction centre	Rhodopseudomonas viridis	6prc	h:37-258	0.000	R1D
	d1erv__ 20%i.d.	105		6.53	1	0.85	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	Thioltransferase	Thioredoxin	Human (Homo sapiens)	1erv	-	0.500	R1D
	c2fcba_ 10%i.d.	173		6.82	0.85	0.57	not in SCOP 1.53	PDB header: immune system.	Chain: A: PDB Molecule:fc gamma riib;.	.	PDBTitle: human fc gamma receptor iib ectodomain (cd32) .	-	2fcb	a	0.000	1D
	d1otca1 15%i.d.	168		6.84	1	1.00	All beta proteins	OB-fold	Nucleic acid-binding proteins	Single strand DNA-binding domain, SSB	Telomere end binding protein alpha subunit	Oxytricha nova	1otc	a:37-204	0.500	1D
	d1a8l_2 15%i.d.	107		7.82	1	0.82	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	Protein disulfide isomerase	Protein disulfide isomerase	Pyrococcus furiosus	1a8l	120-226	0.500	R1D
	c1lvxa_ 23%i.d.	74		7.82	1	1.00	All alpha proteins	Binding domain of Skn-1	Binding domain of Skn-1	homol. to d1sknp_	-	-	1lvx	a	0.000	R1D
	d1bf5a2 14%i.d.	252		7.85	0.937	1.00	All beta proteins	Common fold of diphtheria toxin/transcription factors/cytochrome f	p53-like transcription factors	p53-like transcription factors	STAT-1, DNA-binding domain	Human (Homo sapiens)	1bf5	a:317-568	0.477	3D
	d1qtsa1 17%i.d.	133		7.91	0.954	1.00	All beta proteins	Immunoglobulin-like beta-sandwich	Clathrin adaptor appendage domain	Clathrin adaptor appendage domain	Alpa-adaptin AP2, N-terminal subdomain	Mouse (Mus musculus)	1qts	a:692-824	0.500	1D
	d1f13a3 15%i.d.	101		7.92	1	1.00	All beta proteins	Immunoglobulin-like beta-sandwich	Transglutaminase	Transglutaminase	Coagulation factor XIII, two C-terminal domains	Human (Homo sapiens), blood	1f13	a:628-728	0.000	3D
	d1ebma2 19%i.d.	124		8.1	1	n/a	Alpha and beta proteins (a+b)	TBP-like	TATA-box binding protein-like	DNA repair glycosylase, N-terminal domain	8-oxoguanine glycosylase	Human (Homo sapiens)	1ebm	a:9-135	0.853	3D